Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:118503279-118993283

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ankrd26 6 118501308 to 118562226 60918 - protein coding gene ankyrin repeat domain 26
Cpgi17904 6 118561721 to 118562565 844 CpG island CpG island 17904
Tssr62663 6 118562204 to 118562216 12 - TSS region transcription start site region 62663
Tssr62664 6 118562226 to 118562280 54 - TSS region transcription start site region 62664
Cacna1c 6 118587240 to 119196418 609178 - protein coding gene calcium channel, voltage-dependent, L type, alpha 1C subunit
Cpgi17905 6 118593643 to 118594041 398 CpG island CpG island 17905
Gm38887 6 118598009 to 118600725 2716 + lncRNA gene predicted gene, 38887
Gm18981 6 118617626 to 118619224 1598 - pseudogene predicted gene, 18981
Tssr62665 6 118637973 to 118637983 10 - TSS region transcription start site region 62665
Tssr62666 6 118658742 to 118658748 6 - TSS region transcription start site region 62666
Tssr62667 6 118748279 to 118748283 4 - TSS region transcription start site region 62667
Gm18008 6 118833065 to 118833611 546 - pseudogene predicted gene, 18008
Gm25905 6 118834900 to 118835000 100 + snRNA gene predicted gene, 25905
1700080F18Rik 6 118846044 to 118852978 6934 lncRNA gene RIKEN cDNA 1700080F18 gene
Tssr62668 6 118861460 to 118861465 5 - TSS region transcription start site region 62668
Tssr58488 6 118880152 to 118880163 11 + TSS region transcription start site region 58488
4931430N09Rik 6 118880158 to 118885543 5385 + lncRNA gene RIKEN cDNA 4931430N09 gene
Tssr58489 6 118880164 to 118880175 11 + TSS region transcription start site region 58489
Tssr62669 6 118883603 to 118883623 20 - TSS region transcription start site region 62669
Tssr62670 6 118968131 to 118968147 16 - TSS region transcription start site region 62670
Tssr62671 6 118968354 to 118968360 6 - TSS region transcription start site region 62671
Tssr62672 6 118987137 to 118987142 5 - TSS region transcription start site region 62672