Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:118234358-118604387

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700069P05Rik 6 118246695 to 118248452 1757 - lincRNA gene RIKEN cDNA 1700069P05 gene
Gm30557 6 118261686 to 118264033 2347 + lincRNA gene predicted gene, 30557
Tssr1983 6 118277520 to 118277522 2 - TSS region transcription start site region 1983
D6Mit109 6 118289424 to 118289555 131 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 109
Gm30498 6 118300168 to 118308384 8216 - lincRNA gene predicted gene, 30498
Tssr58487 6 118348411 to 118348430 19 + TSS region transcription start site region 58487
Tssr62657 6 118350447 to 118350475 28 - TSS region transcription start site region 62657
Tssr1984 6 118374749 to 118374758 9 + TSS region transcription start site region 1984
Bms1 6 118383381 to 118419474 36093 - protein coding gene BMS1, ribosome biogenesis factor
Cpgi17901 6 118419074 to 118419951 877 CpG island CpG island 17901
Tssr62658 6 118419336 to 118419351 15 - TSS region transcription start site region 62658
Tssr62659 6 118419358 to 118419387 29 - TSS region transcription start site region 62659
Tssr62660 6 118419388 to 118419441 53 - TSS region transcription start site region 62660
Zfp248 6 118427319 to 118455506 28187 - protein coding gene zinc finger protein 248
Gm25953 6 118429170 to 118429252 82 + miRNA gene predicted gene, 25953
Gm38885 6 118444798 to 118446249 1451 - lncRNA gene predicted gene, 38885
Cpgi17902 6 118454968 to 118455696 728 CpG island CpG island 17902
Tssr62661 6 118455475 to 118455518 43 - TSS region transcription start site region 62661
Zfp9 6 118461950 to 118479320 17370 - protein coding gene zinc finger protein 9
Cpgi17903 6 118478964 to 118479769 805 CpG island CpG island 17903
Tssr62662 6 118479237 to 118479318 81 - TSS region transcription start site region 62662
Gm18223 6 118486885 to 118487706 821 + pseudogene predicted gene, 18223
Ankrd26 6 118501308 to 118562226 60918 - protein coding gene ankyrin repeat domain 26
Cpgi17904 6 118561721 to 118562565 844 CpG island CpG island 17904
Tssr62663 6 118562204 to 118562216 12 - TSS region transcription start site region 62663
Tssr62664 6 118562226 to 118562280 54 - TSS region transcription start site region 62664
Cacna1c 6 118587240 to 119196418 609178 - protein coding gene calcium channel, voltage-dependent, L type, alpha 1C subunit
Cpgi17905 6 118593643 to 118594041 398 CpG island CpG island 17905
Gm38887 6 118598009 to 118600725 2716 + lncRNA gene predicted gene, 38887