Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:117911475-118191546

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hnrnpf 6 117900340 to 117925622 25282 + protein coding gene heterogeneous nuclear ribonucleoprotein F
Gm43863 6 117916531 to 117917722 1191 - unclassified gene predicted gene, 43863
Cpgi17894 6 117916540 to 117917700 1160 CpG island CpG island 17894
Tssr1980 6 117916811 to 117916820 9 - TSS region transcription start site region 1980
Tssr58470 6 117916992 to 117917006 14 + TSS region transcription start site region 58470
Tssr58471 6 117917012 to 117917021 9 + TSS region transcription start site region 58471
Tssr58472 6 117917281 to 117917349 68 + TSS region transcription start site region 58472
Tssr58473 6 117917359 to 117917377 18 + TSS region transcription start site region 58473
Tssr58474 6 117922650 to 117922660 10 + TSS region transcription start site region 58474
Tssr58475 6 117926559 to 117926563 4 + TSS region transcription start site region 58475
Fxyd4 6 117933559 to 117937692 4133 - protein coding gene FXYD domain-containing ion transport regulator 4
Gm25535 6 117935469 to 117935593 124 - miRNA gene predicted gene, 25535
Tssr62643 6 117937328 to 117937343 15 - TSS region transcription start site region 62643
Tssr62644 6 117937394 to 117937435 41 - TSS region transcription start site region 62644
Tssr62645 6 117937686 to 117937697 11 - TSS region transcription start site region 62645
Gm38884 6 117984703 to 118008651 23948 + lncRNA gene predicted gene, 38884
Cpgi17895 6 117996966 to 117997549 583 CpG island CpG island 17895
Tssr58476 6 117997077 to 117997100 23 + TSS region transcription start site region 58476
Gm4875 6 117997207 to 117997992 785 + pseudogene predicted gene 4875
Cpgi17896 6 117997740 to 117997990 250 CpG island CpG island 17896
Cpgi17897 6 118010789 to 118012306 1517 CpG island CpG island 17897
Tssr58477 6 118011313 to 118011395 82 + TSS region transcription start site region 58477
Tssr58478 6 118011448 to 118011496 48 + TSS region transcription start site region 58478
Rasgef1a 6 118011475 to 118091546 80071 + protein coding gene RasGEF domain family, member 1A
Tssr1981 6 118011497 to 118011511 14 + TSS region transcription start site region 1981
Tssr58479 6 118054831 to 118054839 8 + TSS region transcription start site region 58479
Tssr58480 6 118058185 to 118058196 11 + TSS region transcription start site region 58480
Cpgi17898 6 118065914 to 118066777 863 CpG island CpG island 17898
Tssr58481 6 118066356 to 118066410 54 + TSS region transcription start site region 58481
Tssr58482 6 118084127 to 118084132 5 + TSS region transcription start site region 58482
Mir7044 6 118085192 to 118085263 71 + miRNA gene microRNA 7044
Csgalnact2 6 118107452 to 118139140 31688 - protein coding gene chondroitin sulfate N-acetylgalactosaminyltransferase 2
Gm23908 6 118111914 to 118112045 131 - snoRNA gene predicted gene, 23908
Cpgi17899 6 118138716 to 118139521 805 CpG island CpG island 17899
Tssr62646 6 118139045 to 118139070 25 - TSS region transcription start site region 62646
Tssr62647 6 118139094 to 118139158 64 - TSS region transcription start site region 62647
Ret 6 118151745 to 118197718 45973 - protein coding gene ret proto-oncogene
Tssr62648 6 118155333 to 118155352 19 - TSS region transcription start site region 62648
Tssr58483 6 118163066 to 118163079 13 + TSS region transcription start site region 58483
Tssr58484 6 118163090 to 118163103 13 + TSS region transcription start site region 58484
Tssr58485 6 118163117 to 118163122 5 + TSS region transcription start site region 58485
Tssr62649 6 118166437 to 118166440 3 - TSS region transcription start site region 62649