Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:117219694-117899700

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr62634 6 117299529 to 117299547 18 - TSS region transcription start site region 62634
Gm4640 6 117420577 to 117423617 3040 - lincRNA gene predicted gene 4640
Gm6227 6 117472998 to 117473418 420 - pseudogene predicted gene 6227
Tssr62635 6 117473115 to 117473131 16 - TSS region transcription start site region 62635
D6Mit288 6 117489535 to 117489659 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 288
4930477O03Rik 6 117495066 to 117495483 417 unclassified non-coding RNA gene RIKEN cDNA 4930477O03 gene
6820426E19Rik 6 117495235 to 117500077 4842 + lincRNA gene RIKEN cDNA 6820426E19 gene
D6Mit332 6 117518646 to 117518762 116 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 332
Gm18965 6 117541023 to 117542914 1891 - pseudogene predicted gene, 18965
Gm9946 6 117558835 to 117568244 9409 + lincRNA gene predicted gene 9946
Tssr58445 6 117559694 to 117559700 6 + TSS region transcription start site region 58445
Gm45083 6 117578715 to 117612570 33855 - lincRNA gene predicted gene 45083
Tssr62636 6 117612562 to 117612579 17 - TSS region transcription start site region 62636
Tssr1979 6 117675161 to 117675188 27 - TSS region transcription start site region 1979
1700030F04Rik 6 117679207 to 117751769 72562 - lincRNA gene RIKEN cDNA 1700030F04 gene
Tssr58446 6 117716340 to 117716343 3 + TSS region transcription start site region 58446
Gm7292 6 117716342 to 117718868 2526 + lincRNA gene predicted gene 7292
Gemin6-ps 6 117808720 to 117809220 500 + pseudogene gem nuclear organelle associated protein 6, pseudogene
Cpgi17889 6 117840821 to 117841665 844 CpG island CpG island 17889
Tssr58447 6 117841174 to 117841251 77 + TSS region transcription start site region 58447
Zfp637 6 117841180 to 117845956 4776 + protein coding gene zinc finger protein 637
Tssr58448 6 117841258 to 117841286 28 + TSS region transcription start site region 58448
Tssr58449 6 117861944 to 117861972 28 + TSS region transcription start site region 58449
Cpgi17890 6 117862907 to 117863382 475 CpG island CpG island 17890
Tssr58450 6 117863069 to 117863103 34 + TSS region transcription start site region 58450
Zfp239 6 117863077 to 117872766 9689 + protein coding gene zinc finger protein 239
Cpgi17891 6 117871318 to 117871816 498 CpG island CpG island 17891
Gm38882 6 117878547 to 117884595 6048 + lncRNA gene predicted gene, 38882
Gm38883 6 117878802 to 117881828 3026 - lncRNA gene predicted gene, 38883
Cpgi17892 6 117879081 to 117880110 1029 CpG island CpG island 17892
Tssr62637 6 117879512 to 117879528 16 - TSS region transcription start site region 62637
Tssr58451 6 117879963 to 117879982 19 + TSS region transcription start site region 58451
Tssr58452 6 117879997 to 117880046 49 + TSS region transcription start site region 58452
Tssr62638 6 117891568 to 117891595 27 - TSS region transcription start site region 62638
Gm29509 6 117899201 to 117899521 320 + lincRNA gene predicted gene 29509