Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:117176023-117907914

Filter by:
74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cxcl12 6 117168535 to 117181367 12832 + protein coding gene chemokine (C-X-C motif) ligand 12
Tssr58435 6 117178695 to 117178707 12 + TSS region transcription start site region 58435
Tssr58436 6 117178712 to 117178725 13 + TSS region transcription start site region 58436
Tssr58437 6 117178787 to 117178801 14 + TSS region transcription start site region 58437
Tssr58438 6 117178960 to 117178968 8 + TSS region transcription start site region 58438
Tssr58439 6 117178983 to 117178990 7 + TSS region transcription start site region 58439
Tssr58440 6 117179016 to 117179044 28 + TSS region transcription start site region 58440
Tssr62630 6 117179092 to 117179110 18 - TSS region transcription start site region 62630
Tssr58441 6 117179208 to 117179235 27 + TSS region transcription start site region 58441
Tssr62631 6 117179360 to 117179377 17 - TSS region transcription start site region 62631
Tssr58442 6 117179655 to 117179661 6 + TSS region transcription start site region 58442
Tssr62632 6 117179827 to 117179849 22 - TSS region transcription start site region 62632
Tssr58443 6 117179971 to 117179983 12 + TSS region transcription start site region 58443
Tssr58444 6 117180895 to 117180907 12 + TSS region transcription start site region 58444
Rpl28-ps4 6 117213690 to 117214066 376 - pseudogene ribosomal protein L28, pseudogene 4
Tssr62633 6 117214105 to 117214114 9 - TSS region transcription start site region 62633
Tssr62634 6 117299529 to 117299547 18 - TSS region transcription start site region 62634
Gm4640 6 117420577 to 117423617 3040 - lincRNA gene predicted gene 4640
Gm6227 6 117472998 to 117473418 420 - pseudogene predicted gene 6227
Tssr62635 6 117473115 to 117473131 16 - TSS region transcription start site region 62635
D6Mit288 6 117489535 to 117489659 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 288
4930477O03Rik 6 117495066 to 117495483 417 unclassified non-coding RNA gene RIKEN cDNA 4930477O03 gene
6820426E19Rik 6 117495235 to 117500077 4842 + lincRNA gene RIKEN cDNA 6820426E19 gene
D6Mit332 6 117518646 to 117518762 116 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 332
Gm18965 6 117541023 to 117542914 1891 - pseudogene predicted gene, 18965
Gm9946 6 117558835 to 117568244 9409 + lincRNA gene predicted gene 9946
Tssr58445 6 117559694 to 117559700 6 + TSS region transcription start site region 58445
Gm45083 6 117578715 to 117612570 33855 - lincRNA gene predicted gene 45083
Tssr62636 6 117612562 to 117612579 17 - TSS region transcription start site region 62636
Tssr1979 6 117675161 to 117675188 27 - TSS region transcription start site region 1979
1700030F04Rik 6 117679207 to 117751769 72562 - lincRNA gene RIKEN cDNA 1700030F04 gene
Tssr58446 6 117716340 to 117716343 3 + TSS region transcription start site region 58446
Gm7292 6 117716342 to 117718868 2526 + lincRNA gene predicted gene 7292
Gemin6-ps 6 117808720 to 117809220 500 + pseudogene gem nuclear organelle associated protein 6, pseudogene
Cpgi17889 6 117840821 to 117841665 844 CpG island CpG island 17889
Tssr58447 6 117841174 to 117841251 77 + TSS region transcription start site region 58447
Zfp637 6 117841180 to 117845956 4776 + protein coding gene zinc finger protein 637
Tssr58448 6 117841258 to 117841286 28 + TSS region transcription start site region 58448
Tssr58449 6 117861944 to 117861972 28 + TSS region transcription start site region 58449
Cpgi17890 6 117862907 to 117863382 475 CpG island CpG island 17890
Tssr58450 6 117863069 to 117863103 34 + TSS region transcription start site region 58450
Zfp239 6 117863077 to 117872766 9689 + protein coding gene zinc finger protein 239
Cpgi17891 6 117871318 to 117871816 498 CpG island CpG island 17891
Gm38882 6 117878547 to 117884595 6048 + lncRNA gene predicted gene, 38882
Gm38883 6 117878802 to 117881828 3026 - lncRNA gene predicted gene, 38883
Cpgi17892 6 117879081 to 117880110 1029 CpG island CpG island 17892
Tssr62637 6 117879512 to 117879528 16 - TSS region transcription start site region 62637
Tssr58451 6 117879963 to 117879982 19 + TSS region transcription start site region 58451
Tssr58452 6 117879997 to 117880046 49 + TSS region transcription start site region 58452
Tssr62638 6 117891568 to 117891595 27 - TSS region transcription start site region 62638
Gm29509 6 117899201 to 117899521 320 + lincRNA gene predicted gene 29509
Tssr58453 6 117900295 to 117900307 12 + TSS region transcription start site region 58453
Tssr58454 6 117900311 to 117900349 38 + TSS region transcription start site region 58454
Hnrnpf 6 117900340 to 117925622 25282 + protein coding gene heterogeneous nuclear ribonucleoprotein F
Tssr58455 6 117900355 to 117900363 8 + TSS region transcription start site region 58455
Tssr58456 6 117900403 to 117900417 14 + TSS region transcription start site region 58456
Tssr58457 6 117900442 to 117900473 31 + TSS region transcription start site region 58457
4933440N22Rik 6 117905808 to 117907760 1952 - protein coding gene RIKEN cDNA 4933440N22 gene
Cpgi17893 6 117906447 to 117908634 2187 CpG island CpG island 17893
Tssr62639 6 117906494 to 117906502 8 - TSS region transcription start site region 62639
Tssr58458 6 117906720 to 117906726 6 + TSS region transcription start site region 58458
Tssr58459 6 117906755 to 117906801 46 + TSS region transcription start site region 58459
Tssr58460 6 117906809 to 117906863 54 + TSS region transcription start site region 58460
Tssr58461 6 117906897 to 117906922 25 + TSS region transcription start site region 58461
Tssr58462 6 117906936 to 117907008 72 + TSS region transcription start site region 58462
Tssr58463 6 117907025 to 117907029 4 + TSS region transcription start site region 58463
Tssr58464 6 117907071 to 117907093 22 + TSS region transcription start site region 58464
Tssr58465 6 117907102 to 117907153 51 + TSS region transcription start site region 58465
Tssr58466 6 117907173 to 117907184 11 + TSS region transcription start site region 58466
Tssr62640 6 117907661 to 117907671 10 - TSS region transcription start site region 62640
Tssr62641 6 117907695 to 117907733 38 - TSS region transcription start site region 62641
Tssr62642 6 117907753 to 117907761 8 - TSS region transcription start site region 62642
Tssr58467 6 117907776 to 117907786 10 + TSS region transcription start site region 58467
Tssr58468 6 117907795 to 117907832 37 + TSS region transcription start site region 58468