Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:117175577-117668617

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cxcl12 6 117168535 to 117181367 12832 + protein coding gene chemokine (C-X-C motif) ligand 12
Tssr58435 6 117178695 to 117178707 12 + TSS region transcription start site region 58435
Tssr58436 6 117178712 to 117178725 13 + TSS region transcription start site region 58436
Tssr58437 6 117178787 to 117178801 14 + TSS region transcription start site region 58437
Tssr58438 6 117178960 to 117178968 8 + TSS region transcription start site region 58438
Tssr58439 6 117178983 to 117178990 7 + TSS region transcription start site region 58439
Tssr58440 6 117179016 to 117179044 28 + TSS region transcription start site region 58440
Tssr62630 6 117179092 to 117179110 18 - TSS region transcription start site region 62630
Tssr58441 6 117179208 to 117179235 27 + TSS region transcription start site region 58441
Tssr62631 6 117179360 to 117179377 17 - TSS region transcription start site region 62631
Tssr58442 6 117179655 to 117179661 6 + TSS region transcription start site region 58442
Tssr62632 6 117179827 to 117179849 22 - TSS region transcription start site region 62632
Tssr58443 6 117179971 to 117179983 12 + TSS region transcription start site region 58443
Tssr58444 6 117180895 to 117180907 12 + TSS region transcription start site region 58444
Rpl28-ps4 6 117213690 to 117214066 376 - pseudogene ribosomal protein L28, pseudogene 4
Tssr62633 6 117214105 to 117214114 9 - TSS region transcription start site region 62633
Tssr62634 6 117299529 to 117299547 18 - TSS region transcription start site region 62634
Gm4640 6 117420577 to 117423617 3040 - lincRNA gene predicted gene 4640
Gm6227 6 117472998 to 117473418 420 - pseudogene predicted gene 6227
Tssr62635 6 117473115 to 117473131 16 - TSS region transcription start site region 62635
D6Mit288 6 117489535 to 117489659 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 288
4930477O03Rik 6 117495066 to 117495483 417 unclassified non-coding RNA gene RIKEN cDNA 4930477O03 gene
6820426E19Rik 6 117495235 to 117500077 4842 + lincRNA gene RIKEN cDNA 6820426E19 gene
D6Mit332 6 117518646 to 117518762 116 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 332
Gm18965 6 117541023 to 117542914 1891 - pseudogene predicted gene, 18965
Gm9946 6 117558835 to 117568244 9409 + lincRNA gene predicted gene 9946
Tssr58445 6 117559694 to 117559700 6 + TSS region transcription start site region 58445
Gm45083 6 117578715 to 117612570 33855 - lincRNA gene predicted gene 45083
Tssr62636 6 117612562 to 117612579 17 - TSS region transcription start site region 62636