MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:11692173-12123092

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D6Mit87	6	11796164 to 11796295	131		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 87
Ndufa4	6	11900373 to 11907446	7073	-	protein coding gene	Ndufa4, mitochondrial complex associated
Cpgi17160	6	11907173 to 11908092	919		CpG island	CpG island 17160
Tssr59822	6	11907419 to 11907484	65	-	TSS region	transcription start site region 59822
Tssr54938	6	11907751 to 11907793	42	+	TSS region	transcription start site region 54938
Phf14	6	11907809 to 12081205	173396	+	protein coding gene	PHD finger protein 14
Tssr54939	6	11907824 to 11907902	78	+	TSS region	transcription start site region 54939
Cpgi17161	6	11925665 to 11926658	993		CpG island	CpG island 17161
Tssr54940	6	11925869 to 11925941	72	+	TSS region	transcription start site region 54940
Tssr54941	6	11925958 to 11925969	11	+	TSS region	transcription start site region 54941
Tssr54942	6	11926128 to 11926195	67	+	TSS region	transcription start site region 54942
Tssr54943	6	11926758 to 11926790	32	+	TSS region	transcription start site region 54943
Tssr54944	6	11933380 to 11933405	25	+	TSS region	transcription start site region 54944
Tssr54945	6	11935188 to 11935189	1	+	TSS region	transcription start site region 54945
Tssr59823	6	11998347 to 11998351	4	-	TSS region	transcription start site region 59823
Tssr54946	6	12019831 to 12019834	3	+	TSS region	transcription start site region 54946
Tssr54947	6	12041374 to 12041395	21	+	TSS region	transcription start site region 54947
Gm6578	6	12099518 to 12109580	10062	-	pseudogene	predicted gene 6578