Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:116770983-117170984

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36788 6 116771713 to 116775339 3626 - lncRNA gene predicted gene, 36788
Gm36873 6 116794465 to 116860522 66057 + lncRNA gene predicted gene, 36873
Tssr58388 6 116857957 to 116857967 10 + TSS region transcription start site region 58388
Gm43926 6 116953519 to 116953948 429 + pseudogene predicted gene, 43926
Tssr58389 6 116970983 to 116970984 1 + TSS region transcription start site region 58389
Gm43929 6 116982019 to 116982427 408 + pseudogene predicted gene, 43929
Cpgi17887 6 117081111 to 117081342 231 CpG island CpG island 17887
D6Ertd490e 6 117112829 to 117113058 229 DNA segment DNA segment, Chr 6, ERATO Doi 490, expressed
D6Mit367 6 117127231 to 117127378 147 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 367
Gm43930 6 117144325 to 117145169 844 + unclassified gene predicted gene, 43930
2810048H02Rik 6 117145162 to 117152542 7380 - lncRNA gene RIKEN cDNA 2810048H02 gene
D6Mit330 6 117147630 to 117147748 118 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 330
D030044L04Rik 6 117160773 to 117162808 2035 + lincRNA gene RIKEN cDNA D030044L04 gene
Cpgi17888 6 117168318 to 117169541 1223 CpG island CpG island 17888
Cxcl12 6 117168535 to 117181367 12832 + protein coding gene chemokine (C-X-C motif) ligand 12
Tssr58390 6 117168566 to 117168584 18 + TSS region transcription start site region 58390
Tssr58391 6 117169999 to 117170005 6 + TSS region transcription start site region 58391