Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:116174869-116534870

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmcc1 6 116018611 to 116193374 174763 - protein coding gene transmembrane and coiled coil domains 1
Tssr62560 6 116181517 to 116181521 4 - TSS region transcription start site region 62560
Cpgi17880 6 116192685 to 116194073 1388 CpG island CpG island 17880
Tssr62561 6 116193426 to 116193501 75 - TSS region transcription start site region 62561
Gm8213 6 116195418 to 116195858 440 - pseudogene predicted pseudogene 8213
9530062K07Rik 6 116199410 to 116207993 8583 - bidirectional promoter lncRNA gene RIKEN cDNA 9530062K07 gene
Cpgi17881 6 116207754 to 116208587 833 CpG island CpG island 17881
Washc2 6 116208027 to 116262671 54644 + protein coding gene WASH complex subunit 2`
Tssr58354 6 116208030 to 116208114 84 + TSS region transcription start site region 58354
Tssr58355 6 116208116 to 116208130 14 + TSS region transcription start site region 58355
Tssr58356 6 116208185 to 116208197 12 + TSS region transcription start site region 58356
Tssr58357 6 116226258 to 116226264 6 + TSS region transcription start site region 58357
Tssr58358 6 116226966 to 116226980 14 + TSS region transcription start site region 58358
Gm44103 6 116260434 to 116264095 3661 - unclassified gene predicted gene, 44103
Cpgi17882 6 116263899 to 116264636 737 CpG island CpG island 17882
Tssr62562 6 116264043 to 116264057 14 - TSS region transcription start site region 62562
Tssr58359 6 116264186 to 116264225 39 + TSS region transcription start site region 58359
Zfand4 6 116264222 to 116330302 66080 + protein coding gene zinc finger, AN1-type domain 4
Tssr58360 6 116264227 to 116264266 39 + TSS region transcription start site region 58360
Tssr58361 6 116264273 to 116264282 9 + TSS region transcription start site region 58361
Tssr58362 6 116286552 to 116286582 30 + TSS region transcription start site region 58362
Gm44957 6 116335233 to 116337949 2716 - unclassified non-coding RNA gene predicted gene 44957
Cpgi17883 6 116337721 to 116338537 816 CpG island CpG island 17883
Tssr58363 6 116337871 to 116337898 27 + TSS region transcription start site region 58363
Tssr58364 6 116337900 to 116337911 11 + TSS region transcription start site region 58364
Tssr58365 6 116337999 to 116338010 11 + TSS region transcription start site region 58365
Tssr58366 6 116338013 to 116338083 70 + TSS region transcription start site region 58366
March8 6 116338024 to 116409540 71516 + protein coding gene membrane-associated ring finger (C3HC4) 8
Tssr58367 6 116338300 to 116338332 32 + TSS region transcription start site region 58367
Tssr58368 6 116338373 to 116338392 19 + TSS region transcription start site region 58368
Tssr58369 6 116350902 to 116350937 35 + TSS region transcription start site region 58369
Tssr58370 6 116354869 to 116354870 1 + TSS region transcription start site region 58370
Tssr58371 6 116358956 to 116358973 17 + TSS region transcription start site region 58371
Gm23527 6 116371939 to 116372068 129 - snoRNA gene predicted gene, 23527
Gm44237 6 116389462 to 116390397 935 + unclassified gene predicted gene, 44237
Alox5 6 116410077 to 116461178 51101 - protein coding gene arachidonate 5-lipoxygenase
Tssr62563 6 116414044 to 116414053 9 - TSS region transcription start site region 62563
Gm38880 6 116420396 to 116448276 27880 + lncRNA gene predicted gene, 38880
Tssr62564 6 116423986 to 116423987 1 - TSS region transcription start site region 62564
Tssr58372 6 116440086 to 116440091 5 + TSS region transcription start site region 58372
Tssr1975 6 116458865 to 116458902 37 - TSS region transcription start site region 1975
Tssr1976 6 116459404 to 116459411 7 + TSS region transcription start site region 1976
Tssr1977 6 116459435 to 116459471 36 + TSS region transcription start site region 1977
Cpgi17884 6 116460624 to 116461264 640 CpG island CpG island 17884
Tssr62565 6 116461120 to 116461140 20 - TSS region transcription start site region 62565
Tssr62566 6 116461151 to 116461172 21 - TSS region transcription start site region 62566
Gm44076 6 116472854 to 116473373 519 + pseudogene predicted gene, 44076
Olfr211 6 116489117 to 116494540 5423 + protein coding gene olfactory receptor 211
Olfr212 6 116506516 to 116517965 11449 + protein coding gene olfactory receptor 212