Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:115773600-115933615

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cand2 6 115774557 to 115805555 30998 + protein coding gene cullin-associated and neddylation-dissociated 2 (putative)
Cpgi17874 6 115774559 to 115774724 165 CpG island CpG island 17874
Tssr58325 6 115774564 to 115774609 45 + TSS region transcription start site region 58325
Mir7660 6 115775657 to 115775719 62 + miRNA gene microRNA 7660
Cpgi17875 6 115792065 to 115792654 589 CpG island CpG island 17875
Tssr1972 6 115792928 to 115792967 39 + TSS region transcription start site region 1972
Cpgi17876 6 115792935 to 115793197 262 CpG island CpG island 17876
Rpl32 6 115805514 to 115808743 3229 - protein coding gene ribosomal protein L32
Snora7a 6 115807975 to 115808103 128 - snoRNA gene small nucleolar RNA, H/ACA box 7A
Cpgi17877 6 115808031 to 115808838 807 CpG island CpG island 17877
Tssr62534 6 115808736 to 115808754 18 - TSS region transcription start site region 62534
Tssr62535 6 115808765 to 115808779 14 - TSS region transcription start site region 62535
Efcab12 6 115810729 to 115838412 27683 - protein coding gene EF-hand calcium binding domain 12
Gm44206 6 115824499 to 115842525 18026 + antisense lncRNA gene predicted gene, 44206
Tssr62536 6 115838183 to 115838199 16 - TSS region transcription start site region 62536
Tssr62537 6 115838203 to 115838223 20 - TSS region transcription start site region 62537
Mbd4 6 115840697 to 115853371 12674 - protein coding gene methyl-CpG binding domain protein 4
Tssr58326 6 115852999 to 115853035 36 + TSS region transcription start site region 58326
Cpgi17878 6 115853086 to 115853908 822 CpG island CpG island 17878
Tssr62538 6 115853299 to 115853343 44 - TSS region transcription start site region 62538
Tssr62539 6 115853346 to 115853389 43 - TSS region transcription start site region 62539
Ift122 6 115853470 to 115926699 73229 + protein coding gene intraflagellar transport 122
Tssr58327 6 115853548 to 115853598 50 + TSS region transcription start site region 58327
Tssr58328 6 115853600 to 115853615 15 + TSS region transcription start site region 58328
Tssr58329 6 115887212 to 115887226 14 + TSS region transcription start site region 58329
Tssr58330 6 115915786 to 115915845 59 + TSS region transcription start site region 58330
Chab3 6 115931748 to 115940036 8288 QTL cholesterol absorption 3
Rho 6 115931748 to 115940036 8288 + protein coding gene rhodopsin
Tssr58331 6 115931855 to 115931858 3 + TSS region transcription start site region 58331
Tssr58332 6 115931897 to 115931919 22 + TSS region transcription start site region 58332
Tssr58333 6 115931922 to 115931937 15 + TSS region transcription start site region 58333
Tssr58334 6 115931938 to 115931963 25 + TSS region transcription start site region 58334
Tssr58335 6 115931964 to 115931978 14 + TSS region transcription start site region 58335
Tssr1973 6 115932156 to 115932174 18 + TSS region transcription start site region 1973
D6Mit44 6 115933269 to 115933416 147 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 44