Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 6:115384485-115584488

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21 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pparg 6 115360951 to 115490399 129448 + protein coding gene peroxisome proliferator activated receptor gamma
Berr6 6 115360951 to 115578340 217389 QTL berghei resistance locus 6
Tssr58309 6 115399234 to 115399264 30 + TSS region transcription start site region 58309
Tssr58310 6 115421998 to 115422004 6 + TSS region transcription start site region 58310
Tssr58311 6 115422040 to 115422067 27 + TSS region transcription start site region 58311
Tssr58312 6 115422081 to 115422103 22 + TSS region transcription start site region 58312
Tssr58313 6 115422121 to 115422134 13 + TSS region transcription start site region 58313
Tssr58314 6 115441523 to 115441534 11 + TSS region transcription start site region 58314
Gm44079 6 115451815 to 115464990 13175 - antisense lncRNA gene predicted gene, 44079
D6Oda17 6 115465109 to 115465296 187 DNA segment DNA segment, Chr 6, Sen-ichi Oda 17
Tssr62510 6 115484485 to 115484488 3 - TSS region transcription start site region 62510
Tssr62511 6 115488851 to 115488861 10 - TSS region transcription start site region 62511
Gm36301 6 115505886 to 115519525 13639 - lncRNA gene predicted gene, 36301
Tssr1969 6 115522104 to 115522106 2 + TSS region transcription start site region 1969
Gm36355 6 115529131 to 115536900 7769 - lincRNA gene predicted gene, 36355
Tssr62512 6 115536969 to 115536998 29 - TSS region transcription start site region 62512
Cpgi17871 6 115544362 to 115545096 734 CpG island CpG island 17871
Tssr58315 6 115544672 to 115544712 40 + TSS region transcription start site region 58315
Tsen2 6 115544703 to 115578340 33637 + protein coding gene tRNA splicing endonuclease subunit 2
Tssr58316 6 115581098 to 115581109 11 + TSS region transcription start site region 58316
Mkrn2os 6 115583547 to 115592576 9029 - protein coding gene makorin, ring finger protein 2, opposite strand