Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:115171114-115551129

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syn2 6 115134902 to 115282006 147104 + protein coding gene synapsin II
Tssr58294 6 115212906 to 115212915 9 + TSS region transcription start site region 58294
Gm17482 6 115227343 to 115259294 31951 + protein coding gene predicted gene, 17482
Tssr58295 6 115238967 to 115238978 11 + TSS region transcription start site region 58295
D6Mit366 6 115242853 to 115242977 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 366
Bhr7 6 115242853 to 115242977 124 QTL bronchial hyperresponsiveness 7
Radpf3 6 115242853 to 146429238 31186385 QTL radiation pulmonary fibrosis 3
Tssr58296 6 115244183 to 115244188 5 + TSS region transcription start site region 58296
Timp4 6 115245616 to 115252303 6687 - protein coding gene tissue inhibitor of metalloproteinase 4
Tssr62501 6 115251807 to 115251818 11 - TSS region transcription start site region 62501
Tssr62502 6 115251839 to 115251867 28 - TSS region transcription start site region 62502
Tssr62503 6 115251877 to 115251888 11 - TSS region transcription start site region 62503
Tssr62504 6 115252063 to 115252072 9 - TSS region transcription start site region 62504
Tssr62505 6 115252167 to 115252203 36 - TSS region transcription start site region 62505
Tssr62506 6 115252263 to 115252299 36 - TSS region transcription start site region 62506
Gm38877 6 115306225 to 115317088 10863 - lncRNA gene predicted gene, 38877
Tssr62507 6 115317066 to 115317082 16 - TSS region transcription start site region 62507
Tssr62508 6 115317105 to 115317114 9 - TSS region transcription start site region 62508
Gm38878 6 115320963 to 115325418 4455 - lncRNA gene predicted gene, 38878
Cpgi17870 6 115360753 to 115362239 1486 CpG island CpG island 17870
Tssr58297 6 115360854 to 115360881 27 + TSS region transcription start site region 58297
Tssr58298 6 115360890 to 115360912 22 + TSS region transcription start site region 58298
Tssr58299 6 115360950 to 115360962 12 + TSS region transcription start site region 58299
Pparg 6 115360951 to 115490399 129448 + protein coding gene peroxisome proliferator activated receptor gamma
Berr6 6 115360951 to 115578340 217389 QTL berghei resistance locus 6
Tssr58300 6 115360978 to 115360989 11 + TSS region transcription start site region 58300
Tssr58301 6 115361012 to 115361047 35 + TSS region transcription start site region 58301
Tssr58302 6 115361065 to 115361101 36 + TSS region transcription start site region 58302
Tssr58303 6 115361114 to 115361129 15 + TSS region transcription start site region 58303
Tssr58304 6 115361214 to 115361223 9 + TSS region transcription start site region 58304
Tssr58305 6 115361252 to 115361280 28 + TSS region transcription start site region 58305
Tssr58306 6 115361290 to 115361299 9 + TSS region transcription start site region 58306
Tssr62509 6 115362223 to 115362230 7 - TSS region transcription start site region 62509
Tssr58307 6 115362311 to 115362322 11 + TSS region transcription start site region 58307
Tssr58308 6 115362343 to 115362360 17 + TSS region transcription start site region 58308
Tssr58309 6 115399234 to 115399264 30 + TSS region transcription start site region 58309
Tssr58310 6 115421998 to 115422004 6 + TSS region transcription start site region 58310
Tssr58311 6 115422040 to 115422067 27 + TSS region transcription start site region 58311
Tssr58312 6 115422081 to 115422103 22 + TSS region transcription start site region 58312
Tssr58313 6 115422121 to 115422134 13 + TSS region transcription start site region 58313
Tssr58314 6 115441523 to 115441534 11 + TSS region transcription start site region 58314
Gm44079 6 115451815 to 115464990 13175 - antisense lncRNA gene predicted gene, 44079
D6Oda17 6 115465109 to 115465296 187 DNA segment DNA segment, Chr 6, Sen-ichi Oda 17
Tssr62510 6 115484485 to 115484488 3 - TSS region transcription start site region 62510
Tssr62511 6 115488851 to 115488861 10 - TSS region transcription start site region 62511
Gm36301 6 115505886 to 115519525 13639 - lncRNA gene predicted gene, 36301
Tssr1969 6 115522104 to 115522106 2 + TSS region transcription start site region 1969
Gm36355 6 115529131 to 115536900 7769 - lincRNA gene predicted gene, 36355
Tssr62512 6 115536969 to 115536998 29 - TSS region transcription start site region 62512
Cpgi17871 6 115544362 to 115545096 734 CpG island CpG island 17871
Tssr58315 6 115544672 to 115544712 40 + TSS region transcription start site region 58315
Tsen2 6 115544703 to 115578340 33637 + protein coding gene tRNA splicing endonuclease subunit 2