Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:114879554-115319648

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vgll4 6 114860628 to 114969994 109366 - protein coding gene vestigial like family member 4
Tssr1968 6 114880538 to 114880541 3 + TSS region transcription start site region 1968
A530060M17Rik 6 114881423 to 114884842 3419 unclassified gene RIKEN cDNA A530060M17 gene
Tssr62494 6 114921778 to 114921837 59 - TSS region transcription start site region 62494
Gm38876 6 114940300 to 114943633 3333 - lncRNA gene predicted gene, 38876
D6Ertd47e 6 114941563 to 114941773 210 DNA segment DNA segment, Chr 6, ERATO Doi 47, expressed
Cpgi17867 6 114968424 to 114970181 1757 CpG island CpG island 17867
Tssr62495 6 114969004 to 114969022 18 - TSS region transcription start site region 62495
Tssr62496 6 114969929 to 114969940 11 - TSS region transcription start site region 62496
Tssr62497 6 114969945 to 114969981 36 - TSS region transcription start site region 62497
Tssr62498 6 114969986 to 114970006 20 - TSS region transcription start site region 62498
Tamm41 6 115004381 to 115037876 33495 - protein coding gene TAM41 mitochondrial translocator assembly and maintenance homolog
Cpgi17868 6 115037327 to 115038045 718 CpG island CpG island 17868
Tssr62499 6 115037824 to 115037881 57 - TSS region transcription start site region 62499
Tssr62500 6 115039190 to 115039198 8 - TSS region transcription start site region 62500
Gm36190 6 115059336 to 115062422 3086 - lncRNA gene predicted gene, 36190
Gm24767 6 115099554 to 115099648 94 + miRNA gene predicted gene, 24767
Gm44010 6 115109339 to 115109669 330 + pseudogene predicted gene, 44010
Gm17733 6 115127600 to 115134835 7235 - bidirectional promoter lncRNA gene predicted gene, 17733
Cpgi17869 6 115134566 to 115135818 1252 CpG island CpG island 17869
Tssr58291 6 115134899 to 115134982 83 + TSS region transcription start site region 58291
Syn2 6 115134902 to 115282006 147104 + protein coding gene synapsin II
Tssr58292 6 115134990 to 115134993 3 + TSS region transcription start site region 58292
Tssr58293 6 115138514 to 115138518 4 + TSS region transcription start site region 58293
Gm18325 6 115159097 to 115159931 834 - pseudogene predicted gene, 18325
Tssr58294 6 115212906 to 115212915 9 + TSS region transcription start site region 58294
Gm17482 6 115227343 to 115259294 31951 + protein coding gene predicted gene, 17482
Tssr58295 6 115238967 to 115238978 11 + TSS region transcription start site region 58295
D6Mit366 6 115242853 to 115242977 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 366
Bhr7 6 115242853 to 115242977 124 QTL bronchial hyperresponsiveness 7
Radpf3 6 115242853 to 146429238 31186385 QTL radiation pulmonary fibrosis 3
Tssr58296 6 115244183 to 115244188 5 + TSS region transcription start site region 58296
Timp4 6 115245616 to 115252303 6687 - protein coding gene tissue inhibitor of metalloproteinase 4
Tssr62501 6 115251807 to 115251818 11 - TSS region transcription start site region 62501
Tssr62502 6 115251839 to 115251867 28 - TSS region transcription start site region 62502
Tssr62503 6 115251877 to 115251888 11 - TSS region transcription start site region 62503
Tssr62504 6 115252063 to 115252072 9 - TSS region transcription start site region 62504
Tssr62505 6 115252167 to 115252203 36 - TSS region transcription start site region 62505
Tssr62506 6 115252263 to 115252299 36 - TSS region transcription start site region 62506
Gm38877 6 115306225 to 115317088 10863 - lncRNA gene predicted gene, 38877
Tssr62507 6 115317066 to 115317082 16 - TSS region transcription start site region 62507
Tssr62508 6 115317105 to 115317114 9 - TSS region transcription start site region 62508