Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:113745005-114215006

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp2b2 6 113743842 to 114042613 298771 - protein coding gene ATPase, Ca++ transporting, plasma membrane 2
Tssr62473 6 113747121 to 113747125 4 - TSS region transcription start site region 62473
Cpgi17855 6 113748349 to 113748941 592 CpG island CpG island 17855
Gm44167 6 113797807 to 113799684 1877 - sense intronic lncRNA gene predicted gene, 44167
Tssr62474 6 113843481 to 113843493 12 - TSS region transcription start site region 62474
Cpgi17856 6 113856995 to 113857158 163 CpG island CpG island 17856
Cpgi17857 6 113890657 to 113892188 1531 CpG island CpG island 17857
Tssr62475 6 113891294 to 113891375 81 - TSS region transcription start site region 62475
D6Oda37 6 113896888 to 113897047 159 DNA segment DNA segment, Chr 6, Sen-ichi Oda 37
Tssr62476 6 113910446 to 113910451 5 - TSS region transcription start site region 62476
Tssr62477 6 113910471 to 113910484 13 - TSS region transcription start site region 62477
Tssr62478 6 113910485 to 113910497 12 - TSS region transcription start site region 62478
Tssr62479 6 113910543 to 113910552 9 - TSS region transcription start site region 62479
Tssr62480 6 113910578 to 113910585 7 - TSS region transcription start site region 62480
D6Oda33 6 113920848 to 113920993 145 DNA segment DNA segment, Chr 6, Sen-ichi Oda 33
Tssr62481 6 113934679 to 113934695 16 - TSS region transcription start site region 62481
Gm15082 6 113937739 to 113940206 2467 + antisense lncRNA gene predicted gene 15082
Tssr62482 6 113980005 to 113980006 1 - TSS region transcription start site region 62482
Tssr1964 6 114004754 to 114004766 12 + TSS region transcription start site region 1964
Gm15083 6 114004789 to 114052265 47476 + antisense lncRNA gene predicted gene 15083
D6Oda24 6 114024174 to 114024319 145 DNA segment DNA segment, Chr 6, Sen-ichi Oda 24
Cpgi17858 6 114041268 to 114042685 1417 CpG island CpG island 17858
Tssr62483 6 114041953 to 114042003 50 - TSS region transcription start site region 62483
Tssr62484 6 114042020 to 114042097 77 - TSS region transcription start site region 62484
Gm43911 6 114053943 to 114054018 75 + pseudogene predicted gene, 43911
Gm43932 6 114062196 to 114062247 51 + pseudogene predicted gene, 43932
D6Mit30 6 114070456 to 114070638 182 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 30
Gm36023 6 114094350 to 114098987 4637 + lncRNA gene predicted gene, 36023
Cpgi17859 6 114094451 to 114094612 161 CpG island CpG island 17859
Cpgi17860 6 114130707 to 114131850 1143 CpG island CpG island 17860
Tssr58261 6 114131229 to 114131246 17 + TSS region transcription start site region 58261
Slc6a11 6 114131241 to 114249886 118645 + protein coding gene solute carrier family 6 (neurotransmitter transporter, GABA), member 11
Tssr58262 6 114131379 to 114131438 59 + TSS region transcription start site region 58262
D6Mit383 6 114135752 to 114135842 90 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology-383
Tssr62485 6 114165480 to 114165488 8 - TSS region transcription start site region 62485
Gm8132 6 114168884 to 114169523 639 - pseudogene predicted gene 8132
D6Mit329 6 114182280 to 114182454 174 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 329
Cia43 6 114182280 to 119760571 5578291 QTL collagen induced arthritis QTL 43