Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:113694971-113736121

23 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Irak2	6	113638467 to 113695026	56559	+	protein coding gene	interleukin-1 receptor-associated kinase 2
Tssr58252	6	113695965 to 113695982	17	+	TSS region	transcription start site region 58252
Cpgi17853	6	113696607 to 113698172	1565		CpG island	CpG island 17853
Tssr62468	6	113696700 to 113696706	6	-	TSS region	transcription start site region 62468
Tatdn2	6	113697050 to 113711069	14019	+	protein coding gene	TatD DNase domain containing 2
Tssr58253	6	113697074 to 113697159	85	+	TSS region	transcription start site region 58253
Tssr58254	6	113697168 to 113697185	17	+	TSS region	transcription start site region 58254
Tssr58255	6	113697190 to 113697232	42	+	TSS region	transcription start site region 58255
Tssr58256	6	113697247 to 113697258	11	+	TSS region	transcription start site region 58256
Tssr58257	6	113697316 to 113697343	27	+	TSS region	transcription start site region 58257
Tssr58258	6	113697376 to 113697392	16	+	TSS region	transcription start site region 58258
Tssr58259	6	113697401 to 113697412	11	+	TSS region	transcription start site region 58259
Tssr58260	6	113702291 to 113702303	12	+	TSS region	transcription start site region 58260
Mir7042	6	113707208 to 113707265	57	+	miRNA gene	microRNA 7042
Gm26982	6	113714971 to 113716121	1150	+	antisense lncRNA gene	predicted gene, 26982
Ghrl	6	113716119 to 113719880	3761	-	protein coding gene	ghrelin
Tssr62469	6	113717673 to 113717713	40	-	TSS region	transcription start site region 62469
D6Oda23	6	113717974 to 113718116	142		DNA segment	DNA segment, Chr 6, Sen-ichi Oda 23
Gm44033	6	113718584 to 113719278	694	+	unclassified gene	predicted gene, 44033
Tssr62470	6	113719450 to 113719468	18	-	TSS region	transcription start site region 62470
Tssr62471	6	113719880 to 113719883	3	-	TSS region	transcription start site region 62471
Gm44053	6	113725223 to 113726151	928	+	lincRNA gene	predicted gene, 44053
Sec13	6	113728052 to 113740681	12629	-	protein coding gene	SEC13 homolog, nuclear pore and COPII coat complex component