Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:113633467-113700026

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17852 6 113638287 to 113638770 483 CpG island CpG island 17852
Irak2 6 113638467 to 113695026 56559 + protein coding gene interleukin-1 receptor-associated kinase 2
Tssr58237 6 113638483 to 113638544 61 + TSS region transcription start site region 58237
Tssr62463 6 113639363 to 113639377 14 - TSS region transcription start site region 62463
Gm43964 6 113640562 to 113641521 959 - antisense lncRNA gene predicted gene, 43964
Tssr58238 6 113650601 to 113650603 2 + TSS region transcription start site region 58238
Tssr62464 6 113654205 to 113654215 10 - TSS region transcription start site region 62464
Tssr58239 6 113654370 to 113654394 24 + TSS region transcription start site region 58239
Tssr62465 6 113654918 to 113654924 6 - TSS region transcription start site region 62465
Tssr62466 6 113660533 to 113660542 9 - TSS region transcription start site region 62466
Tssr58240 6 113660638 to 113660651 13 + TSS region transcription start site region 58240
Tssr58241 6 113660669 to 113660690 21 + TSS region transcription start site region 58241
Tssr1960 6 113660695 to 113660706 11 + TSS region transcription start site region 1960
Tssr58242 6 113660709 to 113660718 9 + TSS region transcription start site region 58242
Tssr58243 6 113668058 to 113668097 39 + TSS region transcription start site region 58243
Tssr1961 6 113670091 to 113670096 5 + TSS region transcription start site region 1961
Tssr1962 6 113670161 to 113670200 39 + TSS region transcription start site region 1962
Tssr58244 6 113673019 to 113673051 32 + TSS region transcription start site region 58244
Gm43963 6 113676732 to 113679219 2487 - unclassified gene predicted gene, 43963
Tssr58245 6 113681911 to 113681925 14 + TSS region transcription start site region 58245
Tssr58246 6 113682041 to 113682057 16 + TSS region transcription start site region 58246
Tssr58247 6 113684096 to 113684116 20 + TSS region transcription start site region 58247
Gm43912 6 113689855 to 113690392 537 + unclassified gene predicted gene, 43912
Tssr62467 6 113690493 to 113690501 8 - TSS region transcription start site region 62467
Tssr58248 6 113690722 to 113690743 21 + TSS region transcription start site region 58248
Tssr58249 6 113690754 to 113690769 15 + TSS region transcription start site region 58249
Tssr58250 6 113690956 to 113690976 20 + TSS region transcription start site region 58250
Tssr58251 6 113690986 to 113690997 11 + TSS region transcription start site region 58251
Tssr58252 6 113695965 to 113695982 17 + TSS region transcription start site region 58252
Cpgi17853 6 113696607 to 113698172 1565 CpG island CpG island 17853
Tssr62468 6 113696700 to 113696706 6 - TSS region transcription start site region 62468
Tatdn2 6 113697050 to 113711069 14019 + protein coding gene TatD DNase domain containing 2
Tssr58253 6 113697074 to 113697159 85 + TSS region transcription start site region 58253
Tssr58254 6 113697168 to 113697185 17 + TSS region transcription start site region 58254
Tssr58255 6 113697190 to 113697232 42 + TSS region transcription start site region 58255
Tssr58256 6 113697247 to 113697258 11 + TSS region transcription start site region 58256
Tssr58257 6 113697316 to 113697343 27 + TSS region transcription start site region 58257
Tssr58258 6 113697376 to 113697392 16 + TSS region transcription start site region 58258
Tssr58259 6 113697401 to 113697412 11 + TSS region transcription start site region 58259