Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:112298350-112488817

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmcd1 6 112273758 to 112330423 56665 + protein coding gene LIM and cysteine-rich domains 1
Tssr1958 6 112305062 to 112305073 11 + TSS region transcription start site region 1958
Tssr62399 6 112352990 to 112352991 1 - TSS region transcription start site region 62399
Ssu2 6 112359324 to 112388023 28699 - protein coding gene ssu-2 homolog (C. elegans)
Tssr62400 6 112388013 to 112388037 24 - TSS region transcription start site region 62400
Gm38873 6 112393085 to 112398174 5089 + lncRNA gene predicted gene, 38873
Gm44336 6 112393350 to 112393817 467 - pseudogene predicted gene, 44336
Gm40395 6 112422733 to 112424511 1778 - lncRNA gene predicted gene, 40395
Gm35649 6 112452799 to 112463888 11089 - lncRNA gene predicted gene, 35649
Cav3 6 112459505 to 112472872 13367 + protein coding gene caveolin 3
Tssr58145 6 112459595 to 112459604 9 + TSS region transcription start site region 58145
Tssr58146 6 112459623 to 112459639 16 + TSS region transcription start site region 58146
Tssr58147 6 112459649 to 112459652 3 + TSS region transcription start site region 58147
Tssr58148 6 112459653 to 112459669 16 + TSS region transcription start site region 58148
Tssr58149 6 112459672 to 112459703 31 + TSS region transcription start site region 58149
Tssr58150 6 112459715 to 112459749 34 + TSS region transcription start site region 58150
Tssr58151 6 112459751 to 112459758 7 + TSS region transcription start site region 58151
Cpgi17821 6 112472197 to 112472438 241 CpG island CpG island 17821
Oxtr 6 112473683 to 112489943 16260 - protein coding gene oxytocin receptor
Tssr62401 6 112475754 to 112475759 5 - TSS region transcription start site region 62401
Cpgi17822 6 112488807 to 112490123 1316 CpG island CpG island 17822