Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Hcga4c | 6 | 1621965 | QTL | home cage activity 4c | ||
Clas1 | 6 | 34782604 | QTL | carcinogen-induced lung adenoma susceptibility 1 | ||
D6Mit54 | 6 | 184 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 54 | ||
Tilss4 | 6 | 13086828 | QTL | TNF-induced lethal shock susceptibility 3 | ||
Tssr62398 | 6 | 7 | - | TSS region | transcription start site region 62398 | |
Cpgi17820 | 6 | 267 | CpG island | CpG island 17820 | ||
Lmcd1 | 6 | 56665 | + | protein coding gene | LIM and cysteine-rich domains 1 | |
Tssr58144 | 6 | 16 | + | TSS region | transcription start site region 58144 | |
5031434C07Rik | 6 | 3244 | - | antisense lncRNA gene | RIKEN cDNA 5031434C07 gene | |
Gm44193 | 6 | 2522 | + | unclassified gene | predicted gene, 44193 | |
Tssr1958 | 6 | 11 | + | TSS region | transcription start site region 1958 | |
Tssr62399 | 6 | 1 | - | TSS region | transcription start site region 62399 | |
Ssu2 | 6 | 28699 | - | protein coding gene | ssu-2 homolog (C. elegans) | |
Tssr62400 | 6 | 24 | - | TSS region | transcription start site region 62400 | |
Gm38873 | 6 | 5089 | + | lncRNA gene | predicted gene, 38873 | |
Gm44336 | 6 | 467 | - | pseudogene | predicted gene, 44336 | |
Gm40395 | 6 | 1778 | - | lncRNA gene | predicted gene, 40395 | |
Gm35649 | 6 | 11089 | - | lncRNA gene | predicted gene, 35649 | |
Cav3 | 6 | 13367 | + | protein coding gene | caveolin 3 | |
Tssr58145 | 6 | 9 | + | TSS region | transcription start site region 58145 | |
Tssr58146 | 6 | 16 | + | TSS region | transcription start site region 58146 | |
Tssr58147 | 6 | 3 | + | TSS region | transcription start site region 58147 | |
Tssr58148 | 6 | 16 | + | TSS region | transcription start site region 58148 | |
Tssr58149 | 6 | 31 | + | TSS region | transcription start site region 58149 | |
Tssr58150 | 6 | 34 | + | TSS region | transcription start site region 58150 | |
Tssr58151 | 6 | 7 | + | TSS region | transcription start site region 58151 | |
Cpgi17821 | 6 | 241 | CpG island | CpG island 17821 | ||
Oxtr | 6 | 16260 | - | protein coding gene | oxytocin receptor | |
Tssr62401 | 6 | 5 | - | TSS region | transcription start site region 62401 | |
Cpgi17822 | 6 | 1316 | CpG island | CpG island 17822 | ||
Tssr62402 | 6 | 16 | - | TSS region | transcription start site region 62402 | |
Tssr62403 | 6 | 9 | - | TSS region | transcription start site region 62403 | |
Tssr58152 | 6 | 11 | + | TSS region | transcription start site region 58152 | |
Tssr58153 | 6 | 13 | + | TSS region | transcription start site region 58153 | |
Tssr58154 | 6 | 34 | + | TSS region | transcription start site region 58154 | |
Tssr58155 | 6 | 32 | + | TSS region | transcription start site region 58155 | |
Tssr62404 | 6 | 9 | - | TSS region | transcription start site region 62404 | |
Cpgi17823 | 6 | 554 | CpG island | CpG island 17823 | ||
Tssr62405 | 6 | 17 | - | TSS region | transcription start site region 62405 | |
Tssr62406 | 6 | 25 | - | TSS region | transcription start site region 62406 | |
Tssr62407 | 6 | 13 | - | TSS region | transcription start site region 62407 | |
Tssr62408 | 6 | 2 | - | TSS region | transcription start site region 62408 | |
Gm27944 | 6 | 102 | + | snRNA gene | predicted gene, 27944 | |
D6Mit107 | 6 | 148 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 107 | ||
Gm35706 | 6 | 4501 | - | lncRNA gene | predicted gene, 35706 | |
Gm15519 | 6 | 1565 | + | pseudogene | predicted gene 15519 | |
D6Mit23 | 6 | 137 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 23 | ||
Gm23002 | 6 | 106 | - | snRNA gene | predicted gene, 23002 | |
Gm5578 | 6 | 1235 | + | pseudogene | predicted pseudogene 5578 | |
Cpgi17824 | 6 | 305 | CpG island | CpG island 17824 | ||
Rad18 | 6 | 76836 | - | protein coding gene | RAD18 E3 ubiquitin protein ligase | |
Tssr62409 | 6 | 9 | - | TSS region | transcription start site region 62409 | |
Tssr62410 | 6 | 10 | - | TSS region | transcription start site region 62410 | |
Tssr62411 | 6 | 11 | - | TSS region | transcription start site region 62411 | |
Tssr62412 | 6 | 4 | - | TSS region | transcription start site region 62412 | |
Cpgi17825 | 6 | 830 | CpG island | CpG island 17825 | ||
Tssr58156 | 6 | 14 | + | TSS region | transcription start site region 58156 | |
Tssr58157 | 6 | 32 | + | TSS region | transcription start site region 58157 | |
Tssr62413 | 6 | 16 | - | TSS region | transcription start site region 62413 | |
Tssr62414 | 6 | 41 | - | TSS region | transcription start site region 62414 | |
Tssr58158 | 6 | 40 | + | TSS region | transcription start site region 58158 | |
Tssr58159 | 6 | 14 | + | TSS region | transcription start site region 58159 | |
Gm35824 | 6 | 1583 | + | lncRNA gene | predicted gene, 35824 | |
Gm26799 | 6 | 4384 | + | lincRNA gene | predicted gene, 26799 | |
Srgap3 | 6 | 229295 | - | protein coding gene | SLIT-ROBO Rho GTPase activating protein 3 | |
Tssr62415 | 6 | 23 | - | TSS region | transcription start site region 62415 | |
Tssr62416 | 6 | 4 | - | TSS region | transcription start site region 62416 | |
Tssr62417 | 6 | 12 | - | TSS region | transcription start site region 62417 | |
Tssr62418 | 6 | 5 | - | TSS region | transcription start site region 62418 | |
Cpgi17826 | 6 | 212 | CpG island | CpG island 17826 | ||
Tssr62419 | 6 | 1 | - | TSS region | transcription start site region 62419 | |
2310039F13Rik | 6 | 394 | unclassified gene | RIKEN cDNA 2310039F13 gene | ||
Tssr62420 | 6 | 6 | - | TSS region | transcription start site region 62420 | |
D6Mit328 | 6 | 124 | DNA segment | DNA Segment, Chr 6, Massachusetts Institute of Technology 328 | ||
Tssr62421 | 6 | 1 | - | TSS region | transcription start site region 62421 | |
D6Oda19 | 6 | 242 | DNA segment | DNA segment, Chr 6, Sen-ichi Oda 19 | ||
Gm19021 | 6 | 653 | + | pseudogene | predicted gene, 19021 | |
Tssr62422 | 6 | 12 | - | TSS region | transcription start site region 62422 | |
Tssr62423 | 6 | 4 | - | TSS region | transcription start site region 62423 | |
Cpgi17827 | 6 | 534 | CpG island | CpG island 17827 | ||
Tssr62424 | 6 | 11 | - | TSS region | transcription start site region 62424 | |
Gm44081 | 6 | 2293 | + | lincRNA gene | predicted gene, 44081 | |
Tssr62425 | 6 | 31 | - | TSS region | transcription start site region 62425 | |
Tssr62426 | 6 | 20 | - | TSS region | transcription start site region 62426 | |
Tssr58160 | 6 | 18 | + | TSS region | transcription start site region 58160 | |
Tssr58161 | 6 | 4 | + | TSS region | transcription start site region 58161 | |
Gm6134 | 6 | 170 | + | pseudogene | predicted pseudogene 6134 | |
Gm43865 | 6 | 126 | - | pseudogene | predicted gene, 43865 | |
Gm8083 | 6 | 474 | + | pseudogene | predicted gene 8083 | |
Gm23244 | 6 | 91 | - | snRNA gene | predicted gene, 23244 | |
Gm43868 | 6 | 2113 | - | unclassified gene | predicted gene, 43868 | |
Cpgi17828 | 6 | 872 | CpG island | CpG island 17828 | ||
Tssr62427 | 6 | 14 | - | TSS region | transcription start site region 62427 | |
Thumpd3 | 6 | 22029 | + | protein coding gene | THUMP domain containing 3 | |
Tssr58162 | 6 | 65 | + | TSS region | transcription start site region 58162 | |
Tssr58163 | 6 | 17 | + | TSS region | transcription start site region 58163 | |
Tssr58164 | 6 | 11 | + | TSS region | transcription start site region 58164 | |
Gm22591 | 6 | 105 | + | snRNA gene | predicted gene, 22591 | |
Tssr58165 | 6 | 24 | + | TSS region | transcription start site region 58165 | |
Gt(ROSA)26Sor | 6 | 9816 | - | antisense lncRNA gene | gene trap ROSA 26, Philippe Soriano | |
Gm46982 | 6 | 8244 | + | protein coding gene | predicted gene, 46982 | |
Cpgi17829 | 6 | 2275 | CpG island | CpG island 17829 | ||
Tssr62428 | 6 | 10 | - | TSS region | transcription start site region 62428 | |
Tssr62429 | 6 | 22 | - | TSS region | transcription start site region 62429 | |
Tssr62430 | 6 | 13 | - | TSS region | transcription start site region 62430 | |
Tssr58166 | 6 | 28 | + | TSS region | transcription start site region 58166 | |
Setd5 | 6 | 76070 | + | protein coding gene | SET domain containing 5 | |
Tssr58167 | 6 | 15 | + | TSS region | transcription start site region 58167 | |
Tssr58168 | 6 | 11 | + | TSS region | transcription start site region 58168 | |
Tssr58169 | 6 | 56 | + | TSS region | transcription start site region 58169 | |
Tssr58170 | 6 | 11 | + | TSS region | transcription start site region 58170 | |
Tssr58171 | 6 | 4 | + | TSS region | transcription start site region 58171 | |
D6Oda20 | 6 | 150 | DNA segment | DNA segment, Chr 6, Sen-ichi Oda 20 | ||
Tssr58172 | 6 | 6 | + | TSS region | transcription start site region 58172 | |
Tssr58173 | 6 | 18 | + | TSS region | transcription start site region 58173 | |
Tssr58174 | 6 | 17 | + | TSS region | transcription start site region 58174 | |
Tssr58175 | 6 | 33 | + | TSS region | transcription start site region 58175 | |
Tssr58176 | 6 | 3 | + | TSS region | transcription start site region 58176 | |
Lhfpl4 | 6 | 27294 | - | protein coding gene | lipoma HMGIC fusion partner-like protein 4 | |
Cpgi17830 | 6 | 163 | CpG island | CpG island 17830 | ||
Cpgi17831 | 6 | 268 | CpG island | CpG island 17831 | ||
Cpgi17832 | 6 | 756 | CpG island | CpG island 17832 | ||
Cpgi17833 | 6 | 1078 | CpG island | CpG island 17833 | ||
Tssr62431 | 6 | 36 | - | TSS region | transcription start site region 62431 | |
Tssr62432 | 6 | 7 | - | TSS region | transcription start site region 62432 | |
D6Mit378 | 6 | 124 | DNA segment | DNA Segment, Chr 6, Massachusetts Institute of Technology-378 | ||
Tssr58177 | 6 | 2 | + | TSS region | transcription start site region 58177 | |
Cpgi17834 | 6 | 702 | CpG island | CpG island 17834 | ||
Mtmr14 | 6 | 43549 | + | protein coding gene | myotubularin related protein 14 | |
Tssr58178 | 6 | 29 | + | TSS region | transcription start site region 58178 | |
Tssr58179 | 6 | 31 | + | TSS region | transcription start site region 58179 | |
Tssr62433 | 6 | 25 | - | TSS region | transcription start site region 62433 | |
Tssr58180 | 6 | 25 | + | TSS region | transcription start site region 58180 | |
Gm16161 | 6 | 1093 | - | antisense lncRNA gene | predicted gene 16161 | |
Cpgi17835 | 6 | 592 | CpG island | CpG island 17835 | ||
Cpne9 | 6 | 23303 | + | protein coding gene | copine family member IX | |
Tssr58181 | 6 | 14 | + | TSS region | transcription start site region 58181 | |
Tssr58182 | 6 | 18 | + | TSS region | transcription start site region 58182 | |
Tssr58183 | 6 | 15 | + | TSS region | transcription start site region 58183 | |
Cpgi17836 | 6 | 404 | CpG island | CpG island 17836 | ||
Tssr58184 | 6 | 30 | + | TSS region | transcription start site region 58184 | |
Cpgi17837 | 6 | 276 | CpG island | CpG island 17837 | ||
Tssr58185 | 6 | 4 | + | TSS region | transcription start site region 58185 | |
Tssr58186 | 6 | 8 | + | TSS region | transcription start site region 58186 | |
Tssr58187 | 6 | 7 | + | TSS region | transcription start site region 58187 | |
Tssr58188 | 6 | 9 | + | TSS region | transcription start site region 58188 | |
Gm43935 | 6 | 1049 | - | unclassified gene | predicted gene, 43935 | |
Cpgi17838 | 6 | 1719 | CpG island | CpG island 17838 | ||
Tssr58189 | 6 | 27 | + | TSS region | transcription start site region 58189 | |
Brpf1 | 6 | 17723 | + | protein coding gene | bromodomain and PHD finger containing, 1 | |
Tssr58190 | 6 | 70 | + | TSS region | transcription start site region 58190 | |
Tssr58191 | 6 | 7 | + | TSS region | transcription start site region 58191 | |
Tssr62434 | 6 | 19 | - | TSS region | transcription start site region 62434 | |
Tssr58192 | 6 | 20 | + | TSS region | transcription start site region 58192 | |
Tssr58193 | 6 | 18 | + | TSS region | transcription start site region 58193 | |
Gm15492 | 6 | 18081 | - | antisense lncRNA gene | predicted gene 15492 | |
Cpgi17839 | 6 | 1102 | CpG island | CpG island 17839 | ||
Tssr62435 | 6 | 50 | - | TSS region | transcription start site region 62435 | |
Tssr62436 | 6 | 24 | - | TSS region | transcription start site region 62436 | |
Ogg1 | 6 | 7212 | + | protein coding gene | 8-oxoguanine DNA-glycosylase 1 | |
Tssr58194 | 6 | 23 | + | TSS region | transcription start site region 58194 | |
Tssr58195 | 6 | 12 | + | TSS region | transcription start site region 58195 | |
Tssr58196 | 6 | 16 | + | TSS region | transcription start site region 58196 | |
Tssr58197 | 6 | 21 | + | TSS region | transcription start site region 58197 | |
Tssr58198 | 6 | 28 | + | TSS region | transcription start site region 58198 | |
Camk1 | 6 | 9798 | - | protein coding gene | calcium/calmodulin-dependent protein kinase I | |
Cpgi17840 | 6 | 357 | CpG island | CpG island 17840 | ||
Tssr62437 | 6 | 68 | - | TSS region | transcription start site region 62437 | |
Tssr62438 | 6 | 14 | - | TSS region | transcription start site region 62438 | |
Lmr4b | 6 | 197 | QTL | leishmaniasis resistance 4b | ||
Cia3 | 6 | 197 | QTL | collagen induced arthritis QTL 3 | ||
D6Mit10 | 6 | 197 | DNA segment | DNA segment, Chr 6, Massachusetts Institute of Technology 10 | ||
Gm20589 | 6 | 1404 | - | pseudogene | predicted gene, 20589 | |
Tada3 | 6 | 11300 | - | protein coding gene | transcriptional adaptor 3 | |
Tssr62439 | 6 | 20 | - | TSS region | transcription start site region 62439 | |
Tssr62440 | 6 | 38 | - | TSS region | transcription start site region 62440 | |
Tssr62441 | 6 | 22 | - | TSS region | transcription start site region 62441 | |
Cpgi17841 | 6 | 1242 | CpG island | CpG island 17841 | ||
Tssr62442 | 6 | 64 | - | TSS region | transcription start site region 62442 | |
Tssr62443 | 6 | 68 | - | TSS region | transcription start site region 62443 | |
Tssr62444 | 6 | 11 | - | TSS region | transcription start site region 62444 | |
Arpc4 | 6 | 12333 | + | protein coding gene | actin related protein 2/3 complex, subunit 4 | |
Tssr58199 | 6 | 33 | + | TSS region | transcription start site region 58199 | |
Tssr58200 | 6 | 34 | + | TSS region | transcription start site region 58200 | |
Tssr58201 | 6 | 29 | + | TSS region | transcription start site region 58201 | |
Tssr58202 | 6 | 24 | + | TSS region | transcription start site region 58202 | |
Tssr58203 | 6 | 4 | + | TSS region | transcription start site region 58203 | |
Tssr58204 | 6 | 28 | + | TSS region | transcription start site region 58204 | |
Tssr58205 | 6 | 13 | + | TSS region | transcription start site region 58205 | |
Ttll3 | 6 | 25323 | + | protein coding gene | tubulin tyrosine ligase-like family, member 3 | |
Tssr58206 | 6 | 9 | + | TSS region | transcription start site region 58206 | |
Tssr58207 | 6 | 1 | + | TSS region | transcription start site region 58207 | |
Cpgi17842 | 6 | 955 | CpG island | CpG island 17842 | ||
Tssr58208 | 6 | 67 | + | TSS region | transcription start site region 58208 | |
Tssr58209 | 6 | 7 | + | TSS region | transcription start site region 58209 | |
Tssr58210 | 6 | 20 | + | TSS region | transcription start site region 58210 |