Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:108659812-110830328

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104 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
0610040F04Rik 6 108577039 to 108660934 83895 - antisense lncRNA gene RIKEN cDNA 0610040F04 gene
Cpgi17812 6 108659129 to 108661733 2604 CpG island CpG island 17812
Tssr62391 6 108659802 to 108659823 21 - TSS region transcription start site region 62391
Tssr58072 6 108660434 to 108660446 12 + TSS region transcription start site region 58072
Tssr58073 6 108660480 to 108660497 17 + TSS region transcription start site region 58073
Tssr58074 6 108660519 to 108660534 15 + TSS region transcription start site region 58074
Tssr58075 6 108660616 to 108660682 66 + TSS region transcription start site region 58075
Bhlhe40 6 108660629 to 108666925 6296 + protein coding gene basic helix-loop-helix family, member e40
Tssr58076 6 108660772 to 108660787 15 + TSS region transcription start site region 58076
Tssr58077 6 108660855 to 108660866 11 + TSS region transcription start site region 58077
Tssr58078 6 108661747 to 108661777 30 + TSS region transcription start site region 58078
Tssr58079 6 108661990 to 108661996 6 + TSS region transcription start site region 58079
Tssr58080 6 108662339 to 108662343 4 + TSS region transcription start site region 58080
Tssr58081 6 108662770 to 108662778 8 + TSS region transcription start site region 58081
Tssr58082 6 108663119 to 108663142 23 + TSS region transcription start site region 58082
Tssr58083 6 108664739 to 108664750 11 + TSS region transcription start site region 58083
Tssr62392 6 108664985 to 108665005 20 - TSS region transcription start site region 62392
Tssr58084 6 108665013 to 108665046 33 + TSS region transcription start site region 58084
Tssr58085 6 108665916 to 108665926 10 + TSS region transcription start site region 58085
Tssr58086 6 108666127 to 108666151 24 + TSS region transcription start site region 58086
Cpgi17813 6 108668316 to 108668754 438 CpG island CpG island 17813
Tssr58087 6 108668558 to 108668590 32 + TSS region transcription start site region 58087
Tssr62393 6 108688506 to 108688510 4 - TSS region transcription start site region 62393
Tssr1957 6 108688529 to 108688537 8 + TSS region transcription start site region 1957
Tssr58088 6 108697809 to 108697819 10 + TSS region transcription start site region 58088
Cpgi17814 6 108700627 to 108700936 309 CpG island CpG island 17814
Gm35359 6 108717531 to 108731381 13850 - lncRNA gene predicted gene, 35359
Tssr62394 6 108731365 to 108731404 39 - TSS region transcription start site region 62394
Cpgi17815 6 108782708 to 108783844 1136 CpG island CpG island 17815
Arl8b 6 108783059 to 108823723 40664 + protein coding gene ADP-ribosylation factor-like 8B
Tssr58089 6 108783064 to 108783116 52 + TSS region transcription start site region 58089
Tssr58090 6 108783117 to 108783135 18 + TSS region transcription start site region 58090
Tssr58091 6 108783207 to 108783245 38 + TSS region transcription start site region 58091
Tssr58092 6 108783249 to 108783262 13 + TSS region transcription start site region 58092
Tssr58093 6 108794879 to 108794924 45 + TSS region transcription start site region 58093
Gm35417 6 108802410 to 108828284 25874 - lncRNA gene predicted gene, 35417
Tssr58094 6 108805677 to 108805684 7 + TSS region transcription start site region 58094
Tssr58095 6 108814985 to 108815006 21 + TSS region transcription start site region 58095
Tssr58096 6 108821571 to 108821610 39 + TSS region transcription start site region 58096
Tssr58097 6 108821613 to 108821643 30 + TSS region transcription start site region 58097
Tssr58098 6 108822336 to 108822340 4 + TSS region transcription start site region 58098
Cpgi17816 6 108828232 to 108829641 1409 CpG island CpG island 17816
Tssr62395 6 108828381 to 108828384 3 - TSS region transcription start site region 62395
Tssr58099 6 108828508 to 108828517 9 + TSS region transcription start site region 58099
Tssr58100 6 108828526 to 108828542 16 + TSS region transcription start site region 58100
Tssr58101 6 108828549 to 108828558 9 + TSS region transcription start site region 58101
Tssr58102 6 108828562 to 108828565 3 + TSS region transcription start site region 58102
Tssr58103 6 108828595 to 108828604 9 + TSS region transcription start site region 58103
Tssr58104 6 108828605 to 108828616 11 + TSS region transcription start site region 58104
Tssr58105 6 108828633 to 108828721 88 + TSS region transcription start site region 58105
Edem1 6 108828641 to 108859356 30715 + protein coding gene ER degradation enhancer, mannosidase alpha-like 1
Tssr58106 6 108828734 to 108828744 10 + TSS region transcription start site region 58106
Tssr58107 6 108829126 to 108829144 18 + TSS region transcription start site region 58107
9430088B20Rik 6 108831845 to 108833441 1596 unclassified gene RIKEN cDNA 9430088B20 gene
Tssr58108 6 108834552 to 108834563 11 + TSS region transcription start site region 58108
Tssr58109 6 108836092 to 108836101 9 + TSS region transcription start site region 58109
Tssr58110 6 108836261 to 108836272 11 + TSS region transcription start site region 58110
Tssr58111 6 108836304 to 108836314 10 + TSS region transcription start site region 58111
Tssr58112 6 108836330 to 108836337 7 + TSS region transcription start site region 58112
Tssr58113 6 108836345 to 108836356 11 + TSS region transcription start site region 58113
Tssr58114 6 108836359 to 108836370 11 + TSS region transcription start site region 58114
Tssr58115 6 108836392 to 108836407 15 + TSS region transcription start site region 58115
Tssr58116 6 108836611 to 108836633 22 + TSS region transcription start site region 58116
Tssr58117 6 108836642 to 108836652 10 + TSS region transcription start site region 58117
Tssr58118 6 108836691 to 108836698 7 + TSS region transcription start site region 58118
Tssr58119 6 108836726 to 108836739 13 + TSS region transcription start site region 58119
Tssr58120 6 108839213 to 108839222 9 + TSS region transcription start site region 58120
Tssr58121 6 108844667 to 108844670 3 + TSS region transcription start site region 58121
Tssr58122 6 108857490 to 108857502 12 + TSS region transcription start site region 58122
Tssr58123 6 108876287 to 108876293 6 + TSS region transcription start site region 58123
Gm6749 6 108882004 to 108882408 404 + protein coding gene predicted pseudogene 6749
Tssr62396 6 108938666 to 108938707 41 - TSS region transcription start site region 62396
D6Mit344 6 108969344 to 108969488 144 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology-344
Tssr58124 6 109125516 to 109125517 1 + TSS region transcription start site region 58124
Gm29781 6 109125685 to 109126162 477 + pseudogene predicted gene, 29781
Gm32858 6 109214242 to 109214826 584 + pseudogene predicted gene, 32858
D6Mit327 6 109332676 to 109332800 124 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 327
Gm44125 6 109386475 to 109386922 447 - pseudogene predicted gene, 44125
Gm4605 6 109443601 to 109444225 624 - pseudogene predicted gene 4605
Tssr62397 6 109505155 to 109505191 36 - TSS region transcription start site region 62397
Gm44161 6 109550371 to 109550623 252 + pseudogene predicted gene, 44161
Tssr58125 6 109739787 to 109739805 18 + TSS region transcription start site region 58125
Gm35467 6 109739812 to 109750328 10516 + lncRNA gene predicted gene, 35467
Tssr58126 6 109739837 to 109739846 9 + TSS region transcription start site region 58126
Tssr58127 6 109874952 to 109874957 5 + TSS region transcription start site region 58127
Gm44162 6 110033389 to 110033932 543 + pseudogene predicted gene, 44162
D6Dcr23 6 110045948 to 110046048 100 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 23
Tssr58128 6 110109214 to 110109215 1 + TSS region transcription start site region 58128
Gm19039 6 110378080 to 110378628 548 + pseudogene predicted gene, 19039
Gm20387 6 110639320 to 110645388 6068 - antisense lncRNA gene predicted gene 20387
Cpgi17817 6 110645481 to 110646388 907 CpG island CpG island 17817
Tssr58129 6 110645572 to 110645588 16 + TSS region transcription start site region 58129
Grm7 6 110645581 to 111567230 921649 + protein coding gene glutamate receptor, metabotropic 7
Tssr58130 6 110645930 to 110645946 16 + TSS region transcription start site region 58130
Tssr58131 6 110648796 to 110648798 2 + TSS region transcription start site region 58131
Tssr58132 6 110649098 to 110649112 14 + TSS region transcription start site region 58132
Tssr58133 6 110663423 to 110663427 4 + TSS region transcription start site region 58133
Tssr58134 6 110714081 to 110714084 3 + TSS region transcription start site region 58134
Tssr58135 6 110736264 to 110736275 11 + TSS region transcription start site region 58135
Gm20386 6 110738350 to 110738481 131 + pseudogene predicted gene 20386
Tssr58136 6 110761044 to 110761047 3 + TSS region transcription start site region 58136
Tssr58137 6 110761134 to 110761149 15 + TSS region transcription start site region 58137
Tssr58138 6 110776552 to 110776556 4 + TSS region transcription start site region 58138
D6Mit148 6 110784293 to 110784431 138 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 148