Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:107937256-108487962

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr58052 6 108065035 to 108065053 18 + TSS region transcription start site region 58052
Setmar 6 108065045 to 108077122 12077 + protein coding gene SET domain without mariner transposase fusion
Sumf1 6 108107028 to 108185582 78554 - protein coding gene sulfatase modifying factor 1
A430109H19Rik 6 108128732 to 108129204 472 unclassified gene RIKEN cDNA A430109H19 gene
Rpl36-ps12 6 108140120 to 108140509 389 - pseudogene ribosomal protein L36, pseudogene 12
Tssr62383 6 108165009 to 108165021 12 - TSS region transcription start site region 62383
Cpgi17808 6 108185083 to 108185685 602 CpG island CpG island 17808
Tssr62384 6 108185552 to 108185587 35 - TSS region transcription start site region 62384
Gm38872 6 108212256 to 108212962 706 - lncRNA gene predicted gene, 38872
Cpgi17809 6 108212837 to 108213447 610 CpG island CpG island 17809
Tssr58053 6 108213086 to 108213123 37 + TSS region transcription start site region 58053
Itpr1 6 108213096 to 108551109 338013 + protein coding gene inositol 1,4,5-trisphosphate receptor 1
Tssr58054 6 108213219 to 108213269 50 + TSS region transcription start site region 58054
Tssr58055 6 108213311 to 108213323 12 + TSS region transcription start site region 58055
Cpgi17810 6 108213838 to 108213993 155 CpG island CpG island 17810
Tssr58056 6 108213928 to 108213944 16 + TSS region transcription start site region 58056
Tssr58057 6 108257910 to 108257915 5 + TSS region transcription start site region 58057
Tssr58058 6 108277106 to 108277124 18 + TSS region transcription start site region 58058
Tssr58059 6 108371740 to 108371743 3 + TSS region transcription start site region 58059
Tssr58060 6 108386727 to 108386742 15 + TSS region transcription start site region 58060
Gm35165 6 108450619 to 108473396 22777 - lncRNA gene predicted gene, 35165
Gm27813 6 108456183 to 108456536 353 + unclassified non-coding RNA gene predicted gene, 27813
Gm44101 6 108470355 to 108472575 2220 - unclassified gene predicted gene, 44101
Tssr62385 6 108471649 to 108471664 15 - TSS region transcription start site region 62385
Tssr62386 6 108472536 to 108472549 13 - TSS region transcription start site region 62386
Tssr58061 6 108473033 to 108473043 10 + TSS region transcription start site region 58061
Tssr58062 6 108473067 to 108473082 15 + TSS region transcription start site region 58062
Tssr58063 6 108473084 to 108473101 17 + TSS region transcription start site region 58063
Tssr58064 6 108473115 to 108473128 13 + TSS region transcription start site region 58064