Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:107513308-108213746

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17806 6 107529291 to 107530465 1174 CpG island CpG island 17806
Tssr58048 6 107529717 to 107529780 63 + TSS region transcription start site region 58048
Lrrn1 6 107529768 to 107570214 40446 + protein coding gene leucine rich repeat protein 1, neuronal
Tssr58049 6 107529796 to 107529807 11 + TSS region transcription start site region 58049
Tssr58050 6 107530137 to 107530196 59 + TSS region transcription start site region 58050
Cpgi17807 6 107531182 to 107531367 185 CpG island CpG island 17807
Tssr58051 6 107554436 to 107554439 3 + TSS region transcription start site region 58051
4933431M02Rik 6 107627774 to 107632549 4775 + lincRNA gene RIKEN cDNA 4933431M02 gene
D6Mit105 6 107795610 to 107795846 236 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 105
Ichs 6 107795610 to 107795846 236 QTL immediate cutaneous hypersensitivity QTL
Gm35017 6 107802698 to 107815057 12359 - lncRNA gene predicted gene, 35017
Vmn1r-ps37 6 107863308 to 107863746 438 + pseudogene vomeronasal 1 receptor, pseudogene 37
Vmn1r-ps38 6 107864522 to 107865343 821 - pseudogene vomeronasal 1 receptor, pseudogene 38
Tssr62382 6 107877519 to 107877520 1 - TSS region transcription start site region 62382
Gm19177 6 107881092 to 107881673 581 + pseudogene predicted gene, 19177
Gm44279 6 107888681 to 107889152 471 + pseudogene predicted gene, 44279
Tssr58052 6 108065035 to 108065053 18 + TSS region transcription start site region 58052
Setmar 6 108065045 to 108077122 12077 + protein coding gene SET domain without mariner transposase fusion
Sumf1 6 108107028 to 108185582 78554 - protein coding gene sulfatase modifying factor 1
A430109H19Rik 6 108128732 to 108129204 472 unclassified gene RIKEN cDNA A430109H19 gene
Rpl36-ps12 6 108140120 to 108140509 389 - pseudogene ribosomal protein L36, pseudogene 12
Tssr62383 6 108165009 to 108165021 12 - TSS region transcription start site region 62383
Cpgi17808 6 108185083 to 108185685 602 CpG island CpG island 17808
Tssr62384 6 108185552 to 108185587 35 - TSS region transcription start site region 62384
Gm38872 6 108212256 to 108212962 706 - lncRNA gene predicted gene, 38872
Cpgi17809 6 108212837 to 108213447 610 CpG island CpG island 17809
Tssr58053 6 108213086 to 108213123 37 + TSS region transcription start site region 58053
Itpr1 6 108213096 to 108551109 338013 + protein coding gene inositol 1,4,5-trisphosphate receptor 1
Tssr58054 6 108213219 to 108213269 50 + TSS region transcription start site region 58054
Tssr58055 6 108213311 to 108213323 12 + TSS region transcription start site region 58055