Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:101808807-103510896

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44176 6 101841195 to 101848050 6855 + lincRNA gene predicted gene, 44176
Cpgi17799 6 101854712 to 101854944 232 CpG island CpG island 17799
Gm44177 6 101913273 to 101915939 2666 + unclassified gene predicted gene, 44177
Gm7924 6 102071466 to 102072250 784 + pseudogene predicted gene 7924
Cntn3 6 102163304 to 102564623 401319 - protein coding gene contactin 3
Gm44189 6 102174030 to 102177112 3082 - unclassified gene predicted gene, 44189
Tssr62361 6 102265696 to 102265699 3 - TSS region transcription start site region 62361
4930587E11Rik 6 102266100 to 102336674 70574 + antisense lncRNA gene RIKEN cDNA 4930587E11 gene
Gm38870 6 102352498 to 102372868 20370 + lncRNA gene predicted gene, 38870
Tssr62362 6 102553896 to 102553900 4 - TSS region transcription start site region 62362
Cpgi17800 6 102563795 to 102564736 941 CpG island CpG island 17800
Tssr62363 6 102564379 to 102564427 48 - TSS region transcription start site region 62363
Tssr62364 6 102564434 to 102564456 22 - TSS region transcription start site region 62364
Gm44422 6 102658807 to 102660896 2089 - pseudogene predicted gene, 44422
Mir6373 6 102794384 to 102794485 101 + miRNA gene microRNA 6373
Gm26022 6 102862368 to 102862475 107 + snRNA gene predicted gene, 26022
Gm44429 6 102937353 to 102937538 185 - pseudogene predicted gene, 44429
Gm44449 6 103167801 to 103167953 152 + pseudogene predicted gene, 44449
D6Mit250 6 103262639 to 103262732 93 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 250
Gm44295 6 103279550 to 103279986 436 - pseudogene predicted gene, 44295
Tssr58005 6 103314632 to 103314649 17 + TSS region transcription start site region 58005
Tssr1954 6 103460777 to 103460778 1 + TSS region transcription start site region 1954
Tssr58006 6 103510578 to 103510605 27 + TSS region transcription start site region 58006
Chl1 6 103510581 to 103733038 222457 + protein coding gene cell adhesion molecule L1-like
Tssr58007 6 103510631 to 103510634 3 + TSS region transcription start site region 58007
Tssr58008 6 103510639 to 103510660 21 + TSS region transcription start site region 58008
Tssr58009 6 103510669 to 103510697 28 + TSS region transcription start site region 58009
Cpgi17801 6 103510714 to 103511068 354 CpG island CpG island 17801
Tssr58010 6 103510773 to 103510784 11 + TSS region transcription start site region 58010
Tssr58011 6 103510835 to 103510867 32 + TSS region transcription start site region 58011
Tssr58012 6 103510874 to 103510898 24 + TSS region transcription start site region 58012