Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:100251046-100651057

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rybp 6 100228565 to 100287358 58793 - protein coding gene RING1 and YY1 binding protein
Gm44045 6 100256708 to 100259227 2519 - unclassified gene predicted gene, 44045
Gm44044 6 100272610 to 100273698 1088 - unclassified gene predicted gene, 44044
Tssr62344 6 100286323 to 100286327 4 - TSS region transcription start site region 62344
Cpgi17788 6 100286390 to 100288374 1984 CpG island CpG island 17788
Tssr62345 6 100287444 to 100287465 21 - TSS region transcription start site region 62345
Tssr62346 6 100287479 to 100287501 22 - TSS region transcription start site region 62346
Tssr57989 6 100451026 to 100451042 16 + TSS region transcription start site region 57989
Tssr57990 6 100451046 to 100451057 11 + TSS region transcription start site region 57990
Gm38868 6 100469239 to 100471237 1998 + lncRNA gene predicted gene, 38868
Gm23234 6 100494681 to 100494814 133 - snoRNA gene predicted gene, 23234
Gm44107 6 100498515 to 100499914 1399 + lincRNA gene predicted gene, 44107
Gm33741 6 100504191 to 100510029 5838 - lncRNA gene predicted gene, 33741
Tssr57991 6 100527350 to 100527395 45 + TSS region transcription start site region 57991
1700049E22Rik 6 100527400 to 100533426 6026 + lincRNA gene RIKEN cDNA 1700049E22 gene
Cpgi17789 6 100562811 to 100564193 1382 CpG island CpG island 17789
5730433K22Rik 6 100568257 to 100569731 1474 unclassified gene RIKEN cDNA 5730433K22 gene
Shq1 6 100571811 to 100671175 99364 - protein coding gene SHQ1 homolog (S. cerevisiae)
Tssr57992 6 100604656 to 100604663 7 + TSS region transcription start site region 57992
Gm6565 6 100604683 to 100605120 437 + pseudogene predicted gene 6565
Gm44108 6 100626519 to 100626940 421 - pseudogene predicted gene, 44108