Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:99878283-99978381

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16101	5	99906048 to 99906704	656		CpG island	CpG island 16101
Tssr47471	5	99906254 to 99906284	30	+	TSS region	transcription start site region 47471
Vamp9	5	99906254 to 99951092	44838	+	protein coding gene	vesicle-associated membrane protein 9
Gm22838	5	99928283 to 99928381	98	-	snRNA gene	predicted gene, 22838
4930535B17Rik	5	99947313 to 99948225	912		unclassified gene	RIKEN cDNA 4930535B17 gene
Hnrnpd	5	99955935 to 99978938	23003	-	protein coding gene	heterogeneous nuclear ribonucleoprotein D
Tssr52059	5	99963771 to 99963794	23	-	TSS region	transcription start site region 52059
Tssr52060	5	99964742 to 99964761	19	-	TSS region	transcription start site region 52060
Tssr52061	5	99964791 to 99964807	16	-	TSS region	transcription start site region 52061
Tssr52062	5	99967246 to 99967276	30	-	TSS region	transcription start site region 52062
Gm42127	5	99967904 to 99976527	8623	-	lncRNA gene	predicted gene, 42127
Tssr52063	5	99976557 to 99976593	36	-	TSS region	transcription start site region 52063
Cpgi16102	5	99977659 to 99979559	1900		CpG island	CpG island 16102
Gm17092	5	99977686 to 99978858	1172	+	antisense lncRNA gene	predicted gene 17092