Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
A930011G23Rik | 5 | 431816 | - | lncRNA gene | RIKEN cDNA A930011G23 gene | |
Tssr52049 | 5 | 20 | - | TSS region | transcription start site region 52049 | |
Tssr52050 | 5 | 47 | - | TSS region | transcription start site region 52050 | |
Tssr47458 | 5 | 13 | + | TSS region | transcription start site region 47458 | |
Tssr47459 | 5 | 11 | + | TSS region | transcription start site region 47459 | |
Tssr47460 | 5 | 8 | + | TSS region | transcription start site region 47460 | |
Tssr47461 | 5 | 8 | + | TSS region | transcription start site region 47461 | |
Tssr52051 | 5 | 5 | - | TSS region | transcription start site region 52051 | |
Tssr47462 | 5 | 14 | + | TSS region | transcription start site region 47462 | |
Gm35314 | 5 | 17556 | + | lncRNA gene | predicted gene, 35314 | |
Tssr47463 | 5 | 3 | + | TSS region | transcription start site region 47463 | |
Cpgi16097 | 5 | 485 | CpG island | CpG island 16097 | ||
Gm42125 | 5 | 7789 | - | lncRNA gene | predicted gene, 42125 | |
Gm35253 | 5 | 10668 | - | lncRNA gene | predicted gene, 35253 | |
Tssr47464 | 5 | 19 | + | TSS region | transcription start site region 47464 | |
Gm35172 | 5 | 2648 | + | lincRNA gene | predicted gene, 35172 | |
Gm16227 | 5 | 738 | - | sense intronic lncRNA gene | predicted gene 16227 | |
D5Mit401 | 5 | 223 | DNA segment | DNA Segment, Chr 5 Massachusetts Institute of Technology 401 | ||
Tssr52052 | 5 | 1 | - | TSS region | transcription start site region 52052 | |
Gm16228 | 5 | 808 | - | pseudogene | predicted gene 16228 | |
Tssr47465 | 5 | 7 | + | TSS region | transcription start site region 47465 | |
Tssr52053 | 5 | 4 | - | TSS region | transcription start site region 52053 | |
4930405H06Rik | 5 | 1226 | + | antisense lncRNA gene | RIKEN cDNA 4930405H06 gene | |
Tssr47466 | 5 | 13 | + | TSS region | transcription start site region 47466 | |
Gm25969 | 5 | 131 | + | snoRNA gene | predicted gene, 25969 | |
Gm38691 | 5 | 9027 | + | lncRNA gene | predicted gene, 38691 | |
Tssr47467 | 5 | 8 | + | TSS region | transcription start site region 47467 | |
Tssr47468 | 5 | 14 | + | TSS region | transcription start site region 47468 | |
Tssr47469 | 5 | 22 | + | TSS region | transcription start site region 47469 | |
4930522N08Rik | 5 | 2035 | + | antisense lncRNA gene | RIKEN cDNA 4930522N08 gene | |
Tssr47470 | 5 | 1 | + | TSS region | transcription start site region 47470 | |
D5Mit155 | 5 | 129 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 155 | ||
Ahl17 | 5 | 129 | QTL | age related hearing loss, early onset 17 | ||
Bglu18 | 5 | 129 | QTL | blood glucose level 18 | ||
Gm16226 | 5 | 16823 | + | antisense lncRNA gene | predicted gene 16226 | |
Tssr52054 | 5 | 4 | - | TSS region | transcription start site region 52054 | |
Cpgi16098 | 5 | 1536 | CpG island | CpG island 16098 | ||
Tssr52055 | 5 | 11 | - | TSS region | transcription start site region 52055 | |
Tssr52056 | 5 | 26 | - | TSS region | transcription start site region 52056 | |
Tssr52057 | 5 | 73 | - | TSS region | transcription start site region 52057 | |
Tssr52058 | 5 | 12 | - | TSS region | transcription start site region 52058 | |
Gm38413 | 5 | 23119 | - | lincRNA gene | predicted gene, 38413 | |
D5Mit238 | 5 | 138 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 238 | ||
Cpgi16099 | 5 | 390 | CpG island | CpG island 16099 | ||
Gm43249 | 5 | 457 | - | pseudogene | predicted gene 43249 | |
Gm42126 | 5 | 2780 | - | lncRNA gene | predicted gene, 42126 | |
Cpgi16100 | 5 | 344 | CpG island | CpG island 16100 | ||
Gm26252 | 5 | 75 | + | snoRNA gene | predicted gene, 26252 | |
Cpgi16101 | 5 | 656 | CpG island | CpG island 16101 | ||
Vamp9 | 5 | 44838 | + | protein coding gene | vesicle-associated membrane protein 9 | |
Tssr47471 | 5 | 30 | + | TSS region | transcription start site region 47471 | |
Gm22838 | 5 | 98 | - | snRNA gene | predicted gene, 22838 | |
4930535B17Rik | 5 | 912 | unclassified gene | RIKEN cDNA 4930535B17 gene | ||
Hnrnpd | 5 | 23003 | - | protein coding gene | heterogeneous nuclear ribonucleoprotein D | |
Tssr52059 | 5 | 23 | - | TSS region | transcription start site region 52059 | |
Tssr52060 | 5 | 19 | - | TSS region | transcription start site region 52060 | |
Tssr52061 | 5 | 16 | - | TSS region | transcription start site region 52061 | |
Tssr52062 | 5 | 30 | - | TSS region | transcription start site region 52062 | |
Gm42127 | 5 | 8623 | - | lncRNA gene | predicted gene, 42127 | |
Tssr52063 | 5 | 36 | - | TSS region | transcription start site region 52063 | |
Cpgi16102 | 5 | 1900 | CpG island | CpG island 16102 | ||
Gm17092 | 5 | 1172 | + | antisense lncRNA gene | predicted gene 17092 | |
Tssr47472 | 5 | 67 | + | TSS region | transcription start site region 47472 | |
Tssr47473 | 5 | 62 | + | TSS region | transcription start site region 47473 | |
Tssr47474 | 5 | 15 | + | TSS region | transcription start site region 47474 | |
Tssr52064 | 5 | 11 | - | TSS region | transcription start site region 52064 | |
Tssr52065 | 5 | 11 | - | TSS region | transcription start site region 52065 | |
Tssr52066 | 5 | 52 | - | TSS region | transcription start site region 52066 | |
4930524J08Rik | 5 | 602 | + | protein coding gene | RIKEN cDNA 4930524J08 gene | |
D5Mit90 | 5 | 114 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 90 | ||
Hnrnpdl | 5 | 6087 | - | protein coding gene | heterogeneous nuclear ribonucleoprotein D-like | |
Tssr52067 | 5 | 21 | - | TSS region | transcription start site region 52067 | |
Tssr52068 | 5 | 4 | - | TSS region | transcription start site region 52068 | |
Cpgi16103 | 5 | 2451 | CpG island | CpG island 16103 | ||
Tssr52069 | 5 | 11 | - | TSS region | transcription start site region 52069 | |
Tssr52070 | 5 | 17 | - | TSS region | transcription start site region 52070 | |
Tssr52071 | 5 | 12 | - | TSS region | transcription start site region 52071 | |
Tssr52072 | 5 | 35 | - | TSS region | transcription start site region 52072 | |
Tssr52073 | 5 | 64 | - | TSS region | transcription start site region 52073 | |
Tssr52074 | 5 | 11 | - | TSS region | transcription start site region 52074 | |
Enoph1 | 5 | 28775 | + | protein coding gene | enolase-phosphatase 1 | |
Tssr47475 | 5 | 79 | + | TSS region | transcription start site region 47475 | |
Lfibq15 | 5 | -1045680 | QTL | liver fibrosis QTL 15 | ||
Gm26363 | 5 | 82 | - | snoRNA gene | predicted gene, 26363 | |
Tmem150c | 5 | 81936 | - | protein coding gene | transmembrane protein 150C | |
Tssr47476 | 5 | 32 | + | TSS region | transcription start site region 47476 | |
Tmem150cos | 5 | 17311 | + | antisense lncRNA gene | transmembrane protein 150C, opposite strand | |
Cpgi16104 | 5 | 809 | CpG island | CpG island 16104 | ||
Gm36167 | 5 | 6866 | + | lncRNA gene | predicted gene, 36167 | |
D5Mit411 | 5 | 215 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 411 | ||
Cpgi16105 | 5 | 308 | CpG island | CpG island 16105 | ||
Tssr52075 | 5 | 9 | - | TSS region | transcription start site region 52075 | |
Cpgi16106 | 5 | 1425 | CpG island | CpG island 16106 | ||
Tssr52076 | 5 | 53 | - | TSS region | transcription start site region 52076 | |
Tssr52077 | 5 | 45 | - | TSS region | transcription start site region 52077 | |
Tssr52078 | 5 | 31 | - | TSS region | transcription start site region 52078 | |
Tssr52079 | 5 | 41 | - | TSS region | transcription start site region 52079 | |
Tssr52080 | 5 | 24 | - | TSS region | transcription start site region 52080 | |
Gm9932 | 5 | 4113 | + | lincRNA gene | predicted gene 9932 | |
Tssr47477 | 5 | 26 | + | TSS region | transcription start site region 47477 | |
Tssr47478 | 5 | 9 | + | TSS region | transcription start site region 47478 | |
2310034O05Rik | 5 | 7357 | + | lincRNA gene | RIKEN cDNA 2310034O05 gene | |
Gm36304 | 5 | 5161 | - | lncRNA gene | predicted gene, 36304 | |
Tssr52081 | 5 | 5 | - | TSS region | transcription start site region 52081 | |
Gm8091 | 5 | 75097 | - | pseudogene | predicted gene 8091 | |
Tssr52082 | 5 | 29 | - | TSS region | transcription start site region 52082 | |
Gm42129 | 5 | 9828 | + | lncRNA gene | predicted gene, 42129 | |
Gm42128 | 5 | 482 | + | lncRNA gene | predicted gene, 42128 | |
Gm45913 | 5 | 4997 | + | unclassified gene | predicted gene, 45913 | |
D5Mit89 | 5 | 146 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 89 | ||
Bmd2 | 5 | -45076674 | QTL | bone mineral density 2 | ||
D5Mit172 | 5 | 144 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 172 | ||
Cpgi16107 | 5 | 488 | CpG island | CpG island 16107 | ||
Sec31a | 5 | 54585 | - | protein coding gene | Sec31 homolog A (S. cerevisiae) | |
Tssr52083 | 5 | 21 | - | TSS region | transcription start site region 52083 | |
Tssr52084 | 5 | 5 | - | TSS region | transcription start site region 52084 | |
Tssr52085 | 5 | 11 | - | TSS region | transcription start site region 52085 | |
Tssr52086 | 5 | 5 | - | TSS region | transcription start site region 52086 | |
Cpgi16108 | 5 | 905 | CpG island | CpG island 16108 | ||
Tssr52087 | 5 | 24 | - | TSS region | transcription start site region 52087 | |
Tssr52088 | 5 | 167 | - | TSS region | transcription start site region 52088 | |
Tssr52089 | 5 | 28 | - | TSS region | transcription start site region 52089 | |
5430416N02Rik | 5 | 8693 | - | lincRNA gene | RIKEN cDNA 5430416N02 gene | |
Gm27553 | 5 | 73 | + | unclassified non-coding RNA gene | predicted gene, 27553 | |
Gm27997 | 5 | 68 | + | unclassified non-coding RNA gene | predicted gene, 27997 | |
Cpgi16109 | 5 | 1100 | CpG island | CpG island 16109 | ||
Gm28030 | 5 | 137 | + | unclassified non-coding RNA gene | predicted gene, 28030 | |
Gm27286 | 5 | 178 | + | unclassified non-coding RNA gene | predicted gene, 27286 | |
Tssr52090 | 5 | 13 | - | TSS region | transcription start site region 52090 | |
Tssr52091 | 5 | 11 | - | TSS region | transcription start site region 52091 | |
Tssr52092 | 5 | 20 | - | TSS region | transcription start site region 52092 | |
Tssr52093 | 5 | 16 | - | TSS region | transcription start site region 52093 | |
Tssr47479 | 5 | 42 | + | TSS region | transcription start site region 47479 | |
Gm42690 | 5 | 1835 | + | unclassified gene | predicted gene 42690 | |
Lin54 | 5 | 58616 | - | protein coding gene | lin-54 homolog (C. elegans) | |
Cpgi16110 | 5 | 720 | CpG island | CpG island 16110 | ||
Cpgi16111 | 5 | 1139 | CpG island | CpG island 16111 | ||
Tssr52094 | 5 | 30 | - | TSS region | transcription start site region 52094 | |
Gm23222 | 5 | 75 | - | miRNA gene | predicted gene, 23222 | |
Tssr52095 | 5 | 11 | - | TSS region | transcription start site region 52095 | |
Tssr52096 | 5 | 16 | - | TSS region | transcription start site region 52096 | |
Tssr52097 | 5 | 36 | - | TSS region | transcription start site region 52097 | |
D5Mit402 | 5 | 123 | DNA segment | DNA Segment, Chr 5 Massachusetts Institute of Technology 402 | ||
Gm19620 | 5 | 433 | - | pseudogene | predicted gene, 19620 | |
Gm23173 | 5 | 159 | - | snRNA gene | predicted gene, 23173 | |
Cpgi16112 | 5 | 990 | CpG island | CpG island 16112 | ||
Cops4 | 5 | 29493 | + | protein coding gene | COP9 signalosome subunit 4 | |
Tssr47480 | 5 | 11 | + | TSS region | transcription start site region 47480 | |
Tssr47481 | 5 | 62 | + | TSS region | transcription start site region 47481 | |
Plac8 | 5 | 18520 | - | protein coding gene | placenta-specific 8 | |
Tssr47482 | 5 | 6 | + | TSS region | transcription start site region 47482 | |
Tssr52098 | 5 | 8 | - | TSS region | transcription start site region 52098 | |
Tssr52099 | 5 | 22 | - | TSS region | transcription start site region 52099 | |
Tssr52100 | 5 | 22 | - | TSS region | transcription start site region 52100 | |
Tssr52101 | 5 | 14 | - | TSS region | transcription start site region 52101 | |
Tssr52102 | 5 | 3 | - | TSS region | transcription start site region 52102 | |
Tssr52103 | 5 | 3 | - | TSS region | transcription start site region 52103 | |
Tssr52104 | 5 | 5 | - | TSS region | transcription start site region 52104 | |
Tssr47483 | 5 | 13 | + | TSS region | transcription start site region 47483 | |
Tssr47484 | 5 | 17 | + | TSS region | transcription start site region 47484 | |
Tssr52105 | 5 | 33 | - | TSS region | transcription start site region 52105 | |
Tssr52106 | 5 | 11 | - | TSS region | transcription start site region 52106 | |
Tssr52107 | 5 | 19 | - | TSS region | transcription start site region 52107 | |
Tssr47485 | 5 | 36 | + | TSS region | transcription start site region 47485 | |
Gm43510 | 5 | 352 | - | pseudogene | predicted gene 43510 | |
Tssr52108 | 5 | 1 | - | TSS region | transcription start site region 52108 | |
Tssr52109 | 5 | 48 | - | TSS region | transcription start site region 52109 | |
Tssr52110 | 5 | 5 | - | TSS region | transcription start site region 52110 | |
Tssr52111 | 5 | 34 | - | TSS region | transcription start site region 52111 | |
D5Mit157 | 5 | 123 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 157 | ||
Lgq6 | 5 | -68654175 | QTL | late growth QTL 6 | ||
W10q16 | 5 | -68654175 | QTL | weight 10 weeks QTL 16 | ||
Tssr52112 | 5 | 40 | - | TSS region | transcription start site region 52112 | |
Tssr47486 | 5 | 12 | + | TSS region | transcription start site region 47486 | |
Hmtb5 | 5 | -27004317 | QTL | hemostasis and thrombosis bleeding time 5 |