Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:98279304-98852047

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi16089	5	98329159 to 98329734	575		CpG island	CpG island 16089
Tssr47447	5	98329298 to 98329350	52	+	TSS region	transcription start site region 47447
Cfap299	5	98329304 to 98802047	472743	+	protein coding gene	cilia and flagella associated protein 299
Cpgi16090	5	98330423 to 98330657	234		CpG island	CpG island 16090
E030032P16Rik	5	98346394 to 98349324	2930	+	unclassified gene	RIKEN cDNA E030032P16 gene
Gm43767	5	98453747 to 98454127	380	+	pseudogene	predicted gene 43767
Mir703	5	98475556 to 98475664	108	-	miRNA gene	microRNA 703
Gm34475	5	98479889 to 98513255	33366	-	lncRNA gene	predicted gene, 34475
Tssr47448	5	98484045 to 98484048	3	+	TSS region	transcription start site region 47448
Tssr52009	5	98484237 to 98484268	31	-	TSS region	transcription start site region 52009
Tssr52010	5	98513191 to 98513233	42	-	TSS region	transcription start site region 52010
Gm24279	5	98541484 to 98541614	130	+	snoRNA gene	predicted gene, 24279
Gm11111	5	98552695 to 98553744	1049	+	protein coding gene	predicted gene 11111
1700010H22Rik	5	98553629 to 98567004	13375	-	lincRNA gene	RIKEN cDNA 1700010H22 gene
Gm42122	5	98567079 to 98573166	6087	+	lncRNA gene	predicted gene, 42122
D5Dcr52	5	98597013 to 98597117	104		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 52
D5Mit399	5	98699870 to 98699992	122		DNA segment	DNA Segment, Chr 5 Massachusetts Institute of Technology 399
Gm34563	5	98832753 to 98854507	21754	-	lncRNA gene	predicted gene, 34563
Cpgi16091	5	98836383 to 98836653	270		CpG island	CpG island 16091