MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:9767866-10657890

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm35139	5	9768991 to 9769317	326	-	pseudogene	predicted gene, 35139
Gm35212	5	9779405 to 9780368	963	+	pseudogene	predicted gene, 35212
D5Mit178	5	9834048 to 9834340	292		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 178
Gm42832	5	9968674 to 9969418	744	+	pseudogene	predicted gene 42832
Gm6586	5	10067365 to 10070678	3313	+	pseudogene	predicted gene 6586
Gm5715	5	10116583 to 10118047	1464	+	pseudogene	predicted gene 5715
D5Mit248	5	10165764 to 10165889	125		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 248
D5Mit248.2	5	10165827 to 10165937	110		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 248.2
Gm10482	5	10187866 to 10237890	50024	+	lincRNA gene	predicted gene 10482
Tssr45163	5	10233954 to 10233960	6	+	TSS region	transcription start site region 45163
Gm28685	5	10235871 to 10236971	1100	-	pseudogene	predicted gene 28685
Gm5152	5	10242041 to 10246526	4485	-	protein coding gene	predicted gene 5152
Gm3313	5	10251073 to 10255489	4416	-	pseudogene	predicted gene 3313
Gm31831	5	10302386 to 10355144	52758	+	lincRNA gene	predicted gene, 31831
Tssr45164	5	10460397 to 10460398	1	+	TSS region	transcription start site region 45164
Gm17091	5	10537285 to 10539532	2247	+	pseudogene	predicted gene 17091
Gm4959	5	10558353 to 10559396	1043	+	pseudogene	predicted gene 4959
D5Mit70	5	10560429 to 10560548	119		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 70
Cpgi15546	5	10634921 to 10635114	193		CpG island	CpG island 15546