Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:97370798-98030815

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dshv2 5 75154687 to 97871944 22717257 QTL dorsal hippocampal volume 2
Pwgrq15 5 77027976 to 97510356 20482380 QTL post-weaning growth rate QTL 15
Ogrq2 5 77027976 to 97510356 20482380 QTL overall growth rate QTL 2
Naa11 5 97382209 to 97392330 10121 - protein coding gene N(alpha)-acetyltransferase 11, NatA catalytic subunit
Cpgi16081 5 97391864 to 97392471 607 CpG island CpG island 16081
Tssr51976 5 97392314 to 97392328 14 - TSS region transcription start site region 51976
Tssr51977 5 97392332 to 97392352 20 - TSS region transcription start site region 51977
Tssr51978 5 97392355 to 97392365 10 - TSS region transcription start site region 51978
Tssr51979 5 97392371 to 97392385 14 - TSS region transcription start site region 51979
4930467D21Rik 5 97392417 to 97588126 195709 + lincRNA gene RIKEN cDNA 4930467D21 gene
Gk2 5 97455161 to 97457008 1847 - protein coding gene glycerol kinase 2
Tssr51980 5 97456971 to 97457007 36 - TSS region transcription start site region 51980
D5Ertd215e 5 97552781 to 97553006 225 DNA segment DNA segment, Chr 5, ERATO Doi 215, expressed
Gm34029 5 97636541 to 97643165 6624 + lncRNA gene predicted gene, 34029
Tssr47431 5 97700798 to 97700815 17 + TSS region transcription start site region 47431
Mono1 5 97701400 to 97701400 0 QTL monocyte differential 1
Tssr1553 5 97710194 to 97710195 1 + TSS region transcription start site region 1553
Gm34097 5 97822522 to 97846957 24435 - lncRNA gene predicted gene, 34097
D5Mit20 5 97871790 to 97871944 154 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 20
Cypr3 5 97871790 to 97871944 154 QTL cytokine production 3
Antxr2 5 97884688 to 98030962 146274 - protein coding gene anthrax toxin receptor 2
Tssr51981 5 97919878 to 97919883 5 - TSS region transcription start site region 51981
Tssr51982 5 97925674 to 97925683 9 - TSS region transcription start site region 51982
Tssr51983 5 97929814 to 97929833 19 - TSS region transcription start site region 51983
Cpgi16082 5 97935190 to 97935859 669 CpG island CpG island 16082
Gdap7 5 97954051 to 97954531 480 unclassified gene ganglioside-induced differentiation-associated-protein 7
Tssr47432 5 97962007 to 97962012 5 + TSS region transcription start site region 47432
Tssr51984 5 97980678 to 97980694 16 - TSS region transcription start site region 51984
Tssr51985 5 97996037 to 97996054 17 - TSS region transcription start site region 51985
C430019N01Rik 5 97999384 to 98000950 1566 - unclassified gene RIKEN cDNA C430019N01 gene
Gm34226 5 98015842 to 98027462 11620 + lncRNA gene predicted gene, 34226
Tssr51986 5 98016902 to 98016916 14 - TSS region transcription start site region 51986
Tssr51987 5 98018222 to 98018240 18 - TSS region transcription start site region 51987
Cpgi16083 5 98030376 to 98031560 1184 CpG island CpG island 16083
Tssr51988 5 98030570 to 98030616 46 - TSS region transcription start site region 51988
Tssr51989 5 98030617 to 98030627 10 - TSS region transcription start site region 51989
Tssr51990 5 98030630 to 98030647 17 - TSS region transcription start site region 51990
Tssr47433 5 98030695 to 98030724 29 + TSS region transcription start site region 47433
Tssr47434 5 98030725 to 98030736 11 + TSS region transcription start site region 47434
Tssr51991 5 98030727 to 98030765 38 - TSS region transcription start site region 51991
Tssr51992 5 98030797 to 98030820 23 - TSS region transcription start site region 51992
Tir10 5 113883925 to 97871790 -16012135 QTL trypanosome infection response 10
Elmaz1 5 116738565 to 97871790 -18866775 QTL elevated maze behavior 1