MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:97147209-97627330

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ogrq2	5	77027976 to 97510356	20482380		QTL	overall growth rate QTL 2
Pwgrq15	5	77027976 to 97510356	20482380		QTL	post-weaning growth rate QTL 15
Gm33609	5	97143026 to 97149848	6822	+	lincRNA gene	predicted gene, 33609
Tssr47429	5	97195572 to 97195598	26	+	TSS region	transcription start site region 47429
Gm2861	5	97195586 to 97207964	12378	+	lincRNA gene	predicted gene 2861
Gm33911	5	97208433 to 97223767	15334	-	lncRNA gene	predicted gene, 33911
Tssr47430	5	97264744 to 97264750	6	+	TSS region	transcription start site region 47430
Gm5560	5	97264828 to 97265719	891	+	pseudogene	predicted pseudogene 5560
Gm33969	5	97325904 to 97348439	22535	+	lincRNA gene	predicted gene, 33969
Naa11	5	97382209 to 97392330	10121	-	protein coding gene	N(alpha)-acetyltransferase 11, NatA catalytic subunit
Cpgi16081	5	97391864 to 97392471	607		CpG island	CpG island 16081
Tssr51976	5	97392314 to 97392328	14	-	TSS region	transcription start site region 51976
Tssr51977	5	97392332 to 97392352	20	-	TSS region	transcription start site region 51977
Tssr51978	5	97392355 to 97392365	10	-	TSS region	transcription start site region 51978
Tssr51979	5	97392371 to 97392385	14	-	TSS region	transcription start site region 51979
4930467D21Rik	5	97392417 to 97588126	195709	+	lincRNA gene	RIKEN cDNA 4930467D21 gene
Gk2	5	97455161 to 97457008	1847	-	protein coding gene	glycerol kinase 2
Tssr51980	5	97456971 to 97457007	36	-	TSS region	transcription start site region 51980
D5Ertd215e	5	97552781 to 97553006	225		DNA segment	DNA segment, Chr 5, ERATO Doi 215, expressed