Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:9712866-10712890

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Grm3 5 9485541 to 9725170 239629 - protein coding gene glutamate receptor, metabotropic 3
Cpgi15544 5 9724918 to 9725375 457 CpG island CpG island 15544
Tssr50113 5 9725151 to 9725163 12 - TSS region transcription start site region 50113
Tssr50114 5 9725229 to 9725248 19 - TSS region transcription start site region 50114
Tssr50115 5 9725253 to 9725265 12 - TSS region transcription start site region 50115
Tssr50116 5 9725277 to 9725297 20 - TSS region transcription start site region 50116
Tssr50117 5 9725305 to 9725345 40 - TSS region transcription start site region 50117
Tssr50118 5 9725404 to 9725468 64 - TSS region transcription start site region 50118
Tssr50119 5 9725472 to 9725483 11 - TSS region transcription start site region 50119
Tssr50120 5 9725794 to 9725862 68 - TSS region transcription start site region 50120
Cpgi15545 5 9725840 to 9726155 315 CpG island CpG island 15545
Gm23312 5 9758839 to 9758940 101 - snRNA gene predicted gene, 23312
Gm35139 5 9768991 to 9769317 326 - pseudogene predicted gene, 35139
Gm35212 5 9779405 to 9780368 963 + pseudogene predicted gene, 35212
D5Mit178 5 9834048 to 9834340 292 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 178
Gm42832 5 9968674 to 9969418 744 + pseudogene predicted gene 42832
Gm6586 5 10067365 to 10070678 3313 + pseudogene predicted gene 6586
Gm5715 5 10116583 to 10118047 1464 + pseudogene predicted gene 5715
D5Mit248 5 10165764 to 10165889 125 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 248
D5Mit248.2 5 10165827 to 10165937 110 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 248.2
Gm10482 5 10187866 to 10237890 50024 + lincRNA gene predicted gene 10482
Tssr45163 5 10233954 to 10233960 6 + TSS region transcription start site region 45163
Gm28685 5 10235871 to 10236971 1100 - pseudogene predicted gene 28685
Gm5152 5 10242041 to 10246526 4485 - protein coding gene predicted gene 5152
Gm3313 5 10251073 to 10255489 4416 - pseudogene predicted gene 3313
Gm31831 5 10302386 to 10355144 52758 + lincRNA gene predicted gene, 31831
Tssr45164 5 10460397 to 10460398 1 + TSS region transcription start site region 45164
Gm17091 5 10537285 to 10539532 2247 + pseudogene predicted gene 17091
Gm4959 5 10558353 to 10559396 1043 + pseudogene predicted gene 4959
D5Mit70 5 10560429 to 10560548 119 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 70
Cpgi15546 5 10634921 to 10635114 193 CpG island CpG island 15546
Gm42828 5 10668075 to 10668543 468 - pseudogene predicted gene 42828
Gm42834 5 10706909 to 10707164 255 - pseudogene predicted gene 42834
Tssr1421 5 10709027 to 10709029 2 + TSS region transcription start site region 1421