Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:97107781-97998006

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dshv2 5 75154687 to 97871944 22717257 QTL dorsal hippocampal volume 2
Pwgrq15 5 77027976 to 97510356 20482380 QTL post-weaning growth rate QTL 15
Ogrq2 5 77027976 to 97510356 20482380 QTL overall growth rate QTL 2
Paqr3 5 97082329 to 97111596 29267 - protein coding gene progestin and adipoQ receptor family member III
Cpgi16080 5 97111147 to 97111909 762 CpG island CpG island 16080
Tssr51973 5 97111545 to 97111554 9 - TSS region transcription start site region 51973
Tssr51974 5 97111565 to 97111586 21 - TSS region transcription start site region 51974
Tssr51975 5 97111589 to 97111632 43 - TSS region transcription start site region 51975
Gm33609 5 97143026 to 97149848 6822 + lincRNA gene predicted gene, 33609
Tssr47429 5 97195572 to 97195598 26 + TSS region transcription start site region 47429
Gm2861 5 97195586 to 97207964 12378 + lincRNA gene predicted gene 2861
Gm33911 5 97208433 to 97223767 15334 - lncRNA gene predicted gene, 33911
Tssr47430 5 97264744 to 97264750 6 + TSS region transcription start site region 47430
Gm5560 5 97264828 to 97265719 891 + pseudogene predicted pseudogene 5560
Gm33969 5 97325904 to 97348439 22535 + lincRNA gene predicted gene, 33969
Naa11 5 97382209 to 97392330 10121 - protein coding gene N(alpha)-acetyltransferase 11, NatA catalytic subunit
Cpgi16081 5 97391864 to 97392471 607 CpG island CpG island 16081
Tssr51976 5 97392314 to 97392328 14 - TSS region transcription start site region 51976
Tssr51977 5 97392332 to 97392352 20 - TSS region transcription start site region 51977
Tssr51978 5 97392355 to 97392365 10 - TSS region transcription start site region 51978
Tssr51979 5 97392371 to 97392385 14 - TSS region transcription start site region 51979
4930467D21Rik 5 97392417 to 97588126 195709 + lincRNA gene RIKEN cDNA 4930467D21 gene
Gk2 5 97455161 to 97457008 1847 - protein coding gene glycerol kinase 2
Tssr51980 5 97456971 to 97457007 36 - TSS region transcription start site region 51980
D5Ertd215e 5 97552781 to 97553006 225 DNA segment DNA segment, Chr 5, ERATO Doi 215, expressed
Gm34029 5 97636541 to 97643165 6624 + lncRNA gene predicted gene, 34029
Tssr47431 5 97700798 to 97700815 17 + TSS region transcription start site region 47431
Mono1 5 97701400 to 97701400 0 QTL monocyte differential 1
Tssr1553 5 97710194 to 97710195 1 + TSS region transcription start site region 1553
Gm34097 5 97822522 to 97846957 24435 - lncRNA gene predicted gene, 34097
Cypr3 5 97871790 to 97871944 154 QTL cytokine production 3
D5Mit20 5 97871790 to 97871944 154 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 20
Antxr2 5 97884688 to 98030962 146274 - protein coding gene anthrax toxin receptor 2
Tssr51981 5 97919878 to 97919883 5 - TSS region transcription start site region 51981
Tssr51982 5 97925674 to 97925683 9 - TSS region transcription start site region 51982
Tssr51983 5 97929814 to 97929833 19 - TSS region transcription start site region 51983
Cpgi16082 5 97935190 to 97935859 669 CpG island CpG island 16082
Gdap7 5 97954051 to 97954531 480 unclassified gene ganglioside-induced differentiation-associated-protein 7
Tssr47432 5 97962007 to 97962012 5 + TSS region transcription start site region 47432
Tssr51984 5 97980678 to 97980694 16 - TSS region transcription start site region 51984
Tssr51985 5 97996037 to 97996054 17 - TSS region transcription start site region 51985
Tir10 5 113883925 to 97871790 -16012135 QTL trypanosome infection response 10
Elmaz1 5 116738565 to 97871790 -18866775 QTL elevated maze behavior 1