Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:96841225-97001238

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Anxa3 5 96793385 to 96845968 52583 + protein coding gene annexin A3
Tssr47415 5 96841995 to 96842026 31 + TSS region transcription start site region 47415
Tssr47416 5 96849498 to 96849510 12 + TSS region transcription start site region 47416
1700016F12Rik 5 96849505 to 96852938 3433 + lincRNA gene RIKEN cDNA 1700016F12 gene
Gm33100 5 96879310 to 96891170 11860 + lncRNA gene predicted gene, 33100
Gm42601 5 96879342 to 96891172 11830 + lincRNA gene predicted gene 42601
Gm42602 5 96879518 to 96882741 3223 + unclassified gene predicted gene 42602
Gm24623 5 96907632 to 96907825 193 + snRNA gene predicted gene, 24623
Gm33370 5 96910341 to 96922175 11834 - lincRNA gene predicted gene, 33370
Tssr47417 5 96911737 to 96911792 55 + TSS region transcription start site region 47417
Gm43147 5 96912700 to 96913241 541 - unclassified gene predicted gene 43147
D5Mit310 5 96913474 to 96913572 98 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 310
D5Mit310.1 5 96913555 to 96913707 152 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 310.1
Tssr47418 5 96917996 to 96918014 18 + TSS region transcription start site region 47418
Tssr47419 5 96918355 to 96918360 5 + TSS region transcription start site region 47419
Tssr51965 5 96921152 to 96921160 8 - TSS region transcription start site region 51965
Tssr51966 5 96921162 to 96921178 16 - TSS region transcription start site region 51966
Tssr51967 5 96921182 to 96921198 16 - TSS region transcription start site region 51967
Tssr51968 5 96921225 to 96921238 13 - TSS region transcription start site region 51968
Gm8013 5 96921272 to 96934867 13595 + lincRNA gene predicted gene 8013
Tssr51969 5 96922141 to 96922156 15 - TSS region transcription start site region 51969
Tssr51970 5 96922176 to 96922188 12 - TSS region transcription start site region 51970
Gm46916 5 96936612 to 96942090 5478 - lncRNA gene predicted gene, 46916
Gm43148 5 96936813 to 96937332 519 + unclassified gene predicted gene 43148
Gm43144 5 96940297 to 96940781 484 + unclassified gene predicted gene 43144
Tssr47420 5 96963165 to 96963192 27 + TSS region transcription start site region 47420
Tssr47421 5 96968821 to 96968837 16 + TSS region transcription start site region 47421
Tssr47422 5 96996020 to 96996033 13 + TSS region transcription start site region 47422
Gm9484 5 96996206 to 96997364 1158 - lincRNA gene predicted gene 9484
Cpgi16078 5 96996771 to 96998472 1701 CpG island CpG island 16078
Tssr1552 5 96997438 to 96997485 47 + TSS region transcription start site region 1552
Tssr47423 5 96997676 to 96997766 90 + TSS region transcription start site region 47423
Bmp2k 5 96997689 to 97091048 93359 + protein coding gene BMP2 inducible kinase