Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:96268955-96889728

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16075 5 96331086 to 96331474 388 CpG island CpG island 16075
Cpgi16076 5 96373534 to 96375074 1540 CpG island CpG island 16076
Fras1 5 96373955 to 96784728 410773 + protein coding gene Fraser extracellular matrix complex subunit 1
Tssr47398 5 96374146 to 96374165 19 + TSS region transcription start site region 47398
Tssr47399 5 96374167 to 96374213 46 + TSS region transcription start site region 47399
Tssr47400 5 96374425 to 96374448 23 + TSS region transcription start site region 47400
Tssr47401 5 96374520 to 96374531 11 + TSS region transcription start site region 47401
D5Mit312 5 96391781 to 96391927 146 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 312
Bglu13 5 96391781 to 96391927 146 QTL blood glucose level 13
Tssr47402 5 96406932 to 96406944 12 + TSS region transcription start site region 47402
Gm33050 5 96456389 to 96457743 1354 - antisense lncRNA gene predicted gene, 33050
Gm42605 5 96485766 to 96486150 384 + unclassified gene predicted gene 42605
Tssr1550 5 96573796 to 96573807 11 + TSS region transcription start site region 1550
Tssr47403 5 96657124 to 96657126 2 + TSS region transcription start site region 47403
Gm32995 5 96729060 to 96733882 4822 - lncRNA gene predicted gene, 32995
Gm42604 5 96735547 to 96739364 3817 - antisense lncRNA gene predicted gene 42604
Tssr51963 5 96739212 to 96739222 10 - TSS region transcription start site region 51963
Tssr51964 5 96739664 to 96739686 22 - TSS region transcription start site region 51964
Tssr1551 5 96747693 to 96747698 5 + TSS region transcription start site region 1551
Tssr47404 5 96793352 to 96793380 28 + TSS region transcription start site region 47404
Cpgi16077 5 96793358 to 96793691 333 CpG island CpG island 16077
Anxa3 5 96793385 to 96845968 52583 + protein coding gene annexin A3
Tssr47405 5 96793387 to 96793404 17 + TSS region transcription start site region 47405
Tssr47406 5 96793413 to 96793424 11 + TSS region transcription start site region 47406
Tssr47407 5 96793426 to 96793431 5 + TSS region transcription start site region 47407
Tssr47408 5 96793453 to 96793528 75 + TSS region transcription start site region 47408
Tssr47409 5 96796082 to 96796093 11 + TSS region transcription start site region 47409
Gm42603 5 96798207 to 96800352 2145 + unclassified gene predicted gene 42603
Tssr47410 5 96799792 to 96799809 17 + TSS region transcription start site region 47410
Tssr47411 5 96824902 to 96824916 14 + TSS region transcription start site region 47411
Tssr47412 5 96827577 to 96827583 6 + TSS region transcription start site region 47412
Tssr47413 5 96831474 to 96831489 15 + TSS region transcription start site region 47413
Tssr47414 5 96837477 to 96837526 49 + TSS region transcription start site region 47414
Tssr47415 5 96841995 to 96842026 31 + TSS region transcription start site region 47415
Tssr47416 5 96849498 to 96849510 12 + TSS region transcription start site region 47416
1700016F12Rik 5 96849505 to 96852938 3433 + lincRNA gene RIKEN cDNA 1700016F12 gene
Gm33100 5 96879310 to 96891170 11860 + lncRNA gene predicted gene, 33100
Gm42601 5 96879342 to 96891172 11830 + lincRNA gene predicted gene 42601
Gm42602 5 96879518 to 96882741 3223 + unclassified gene predicted gene 42602