Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:96201086-96461474

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr47395 5 96209463 to 96209488 25 + TSS region transcription start site region 47395
Mrpl1 5 96209498 to 96266727 57229 + protein coding gene mitochondrial ribosomal protein L1
Tssr47396 5 96209744 to 96209763 19 + TSS region transcription start site region 47396
Cpgi16074 5 96209963 to 96210411 448 CpG island CpG island 16074
Tssr51962 5 96210005 to 96210026 21 - TSS region transcription start site region 51962
Tssr47397 5 96210128 to 96210161 33 + TSS region transcription start site region 47397
Cpgi16075 5 96331086 to 96331474 388 CpG island CpG island 16075
Cpgi16076 5 96373534 to 96375074 1540 CpG island CpG island 16076
Fras1 5 96373955 to 96784728 410773 + protein coding gene Fraser extracellular matrix complex subunit 1
Tssr47398 5 96374146 to 96374165 19 + TSS region transcription start site region 47398
Tssr47399 5 96374167 to 96374213 46 + TSS region transcription start site region 47399
Tssr47400 5 96374425 to 96374448 23 + TSS region transcription start site region 47400
Tssr47401 5 96374520 to 96374531 11 + TSS region transcription start site region 47401
Bglu13 5 96391781 to 96391927 146 QTL blood glucose level 13
D5Mit312 5 96391781 to 96391927 146 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 312
Tssr47402 5 96406932 to 96406944 12 + TSS region transcription start site region 47402
Gm33050 5 96456389 to 96457743 1354 - antisense lncRNA gene predicted gene, 33050