MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:96127615-96197622

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cnot6l	5	96070333 to 96164171	93838	-	protein coding gene	CCR4-NOT transcription complex, subunit 6-like
Tssr51951	5	96131215 to 96131238	23	-	TSS region	transcription start site region 51951
Cpgi16073	5	96160669 to 96162960	2291		CpG island	CpG island 16073
Tssr47392	5	96160757 to 96160765	8	+	TSS region	transcription start site region 47392
Tssr51952	5	96161748 to 96161774	26	-	TSS region	transcription start site region 51952
Tssr51953	5	96162078 to 96162097	19	-	TSS region	transcription start site region 51953
Tssr1549	5	96162170 to 96162216	46	-	TSS region	transcription start site region 1549
Tssr51954	5	96162457 to 96162471	14	-	TSS region	transcription start site region 51954
Tssr51955	5	96162482 to 96162576	94	-	TSS region	transcription start site region 51955
Tssr51956	5	96162584 to 96162595	11	-	TSS region	transcription start site region 51956
Tssr51957	5	96162615 to 96162622	7	-	TSS region	transcription start site region 51957
Tssr51958	5	96163008 to 96163019	11	-	TSS region	transcription start site region 51958
Tssr47393	5	96163215 to 96163222	7	+	TSS region	transcription start site region 47393
Tssr51959	5	96163576 to 96163579	3	-	TSS region	transcription start site region 51959
Tssr51960	5	96164119 to 96164142	23	-	TSS region	transcription start site region 51960
Tssr51961	5	96164147 to 96164201	54	-	TSS region	transcription start site region 51961
Tssr47394	5	96173881 to 96173912	31	+	TSS region	transcription start site region 47394
Gm2840	5	96173940 to 96174350	410	+	pseudogene	predicted gene 2840