Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:96121086-96541474

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cnot6l 5 96070333 to 96164171 93838 - protein coding gene CCR4-NOT transcription complex, subunit 6-like
Tssr51951 5 96131215 to 96131238 23 - TSS region transcription start site region 51951
Cpgi16073 5 96160669 to 96162960 2291 CpG island CpG island 16073
Tssr47392 5 96160757 to 96160765 8 + TSS region transcription start site region 47392
Tssr51952 5 96161748 to 96161774 26 - TSS region transcription start site region 51952
Tssr51953 5 96162078 to 96162097 19 - TSS region transcription start site region 51953
Tssr1549 5 96162170 to 96162216 46 - TSS region transcription start site region 1549
Tssr51954 5 96162457 to 96162471 14 - TSS region transcription start site region 51954
Tssr51955 5 96162482 to 96162576 94 - TSS region transcription start site region 51955
Tssr51956 5 96162584 to 96162595 11 - TSS region transcription start site region 51956
Tssr51957 5 96162615 to 96162622 7 - TSS region transcription start site region 51957
Tssr51958 5 96163008 to 96163019 11 - TSS region transcription start site region 51958
Tssr47393 5 96163215 to 96163222 7 + TSS region transcription start site region 47393
Tssr51959 5 96163576 to 96163579 3 - TSS region transcription start site region 51959
Tssr51960 5 96164119 to 96164142 23 - TSS region transcription start site region 51960
Tssr51961 5 96164147 to 96164201 54 - TSS region transcription start site region 51961
Tssr47394 5 96173881 to 96173912 31 + TSS region transcription start site region 47394
Gm2840 5 96173940 to 96174350 410 + pseudogene predicted gene 2840
Tssr47395 5 96209463 to 96209488 25 + TSS region transcription start site region 47395
Mrpl1 5 96209498 to 96266727 57229 + protein coding gene mitochondrial ribosomal protein L1
Tssr47396 5 96209744 to 96209763 19 + TSS region transcription start site region 47396
Cpgi16074 5 96209963 to 96210411 448 CpG island CpG island 16074
Tssr51962 5 96210005 to 96210026 21 - TSS region transcription start site region 51962
Tssr47397 5 96210128 to 96210161 33 + TSS region transcription start site region 47397
Cpgi16075 5 96331086 to 96331474 388 CpG island CpG island 16075
Cpgi16076 5 96373534 to 96375074 1540 CpG island CpG island 16076
Fras1 5 96373955 to 96784728 410773 + protein coding gene Fraser extracellular matrix complex subunit 1
Tssr47398 5 96374146 to 96374165 19 + TSS region transcription start site region 47398
Tssr47399 5 96374167 to 96374213 46 + TSS region transcription start site region 47399
Tssr47400 5 96374425 to 96374448 23 + TSS region transcription start site region 47400
Tssr47401 5 96374520 to 96374531 11 + TSS region transcription start site region 47401
D5Mit312 5 96391781 to 96391927 146 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 312
Bglu13 5 96391781 to 96391927 146 QTL blood glucose level 13
Tssr47402 5 96406932 to 96406944 12 + TSS region transcription start site region 47402
Gm33050 5 96456389 to 96457743 1354 - antisense lncRNA gene predicted gene, 33050
Gm42605 5 96485766 to 96486150 384 + unclassified gene predicted gene 42605