Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:95783920-96163924

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
E330014E10Rik 5 95775870 to 95804230 28360 + protein coding gene RIKEN cDNA E330014E10 gene
Gm42714 5 95834961 to 95837450 2489 - pseudogene predicted gene 42714
Gm5559 5 95861714 to 95862715 1001 + pseudogene predicted gene 5559
Gm25937 5 95867334 to 95867440 106 + snRNA gene predicted gene, 25937
D5Mit423 5 95943626 to 95943749 123 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 423
Tssr47388 5 95956916 to 95956933 17 + TSS region transcription start site region 47388
Cxcl13 5 95956951 to 95961068 4117 + protein coding gene chemokine (C-X-C motif) ligand 13
Tssr47389 5 95958716 to 95958738 22 + TSS region transcription start site region 47389
Tssr47390 5 95960309 to 95960314 5 + TSS region transcription start site region 47390
Tssr47391 5 95973920 to 95973924 4 + TSS region transcription start site region 47391
Gm7993 5 95974240 to 95975623 1383 + pseudogene predicted gene 7993
D5Mit313 5 96035624 to 96035733 109 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 313
Cnot6l 5 96070333 to 96164171 93838 - protein coding gene CCR4-NOT transcription complex, subunit 6-like
Tssr51946 5 96077145 to 96077161 16 - TSS region transcription start site region 51946
Tssr51947 5 96092514 to 96092518 4 - TSS region transcription start site region 51947
Tssr51948 5 96093089 to 96093093 4 - TSS region transcription start site region 51948
Tssr51949 5 96093351 to 96093355 4 - TSS region transcription start site region 51949
Tssr51950 5 96115602 to 96115613 11 - TSS region transcription start site region 51950
Tssr51951 5 96131215 to 96131238 23 - TSS region transcription start site region 51951
Cpgi16073 5 96160669 to 96162960 2291 CpG island CpG island 16073
Tssr47392 5 96160757 to 96160765 8 + TSS region transcription start site region 47392
Tssr51952 5 96161748 to 96161774 26 - TSS region transcription start site region 51952
Tssr51953 5 96162078 to 96162097 19 - TSS region transcription start site region 51953
Tssr1549 5 96162170 to 96162216 46 - TSS region transcription start site region 1549
Tssr51954 5 96162457 to 96162471 14 - TSS region transcription start site region 51954
Tssr51955 5 96162482 to 96162576 94 - TSS region transcription start site region 51955
Tssr51956 5 96162584 to 96162595 11 - TSS region transcription start site region 51956
Tssr51957 5 96162615 to 96162622 7 - TSS region transcription start site region 51957
Tssr51958 5 96163008 to 96163019 11 - TSS region transcription start site region 51958
Tssr47393 5 96163215 to 96163222 7 + TSS region transcription start site region 47393
Tssr51959 5 96163576 to 96163579 3 - TSS region transcription start site region 51959