Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:93171933-93216495

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sept11 5 93093437 to 93176447 83010 + protein coding gene septin 11
Tssr47367 5 93172472 to 93172484 12 + TSS region transcription start site region 47367
Tssr47368 5 93172764 to 93172778 14 + TSS region transcription start site region 47368
Tssr47369 5 93172792 to 93172815 23 + TSS region transcription start site region 47369
Tssr47370 5 93172935 to 93172950 15 + TSS region transcription start site region 47370
Tssr47371 5 93172994 to 93173019 25 + TSS region transcription start site region 47371
Tssr47372 5 93173027 to 93173047 20 + TSS region transcription start site region 47372
Tssr47373 5 93173062 to 93173104 42 + TSS region transcription start site region 47373
Tssr47374 5 93173584 to 93173633 49 + TSS region transcription start site region 47374
Tssr47375 5 93173677 to 93173681 4 + TSS region transcription start site region 47375
Tssr47376 5 93175352 to 93175355 3 + TSS region transcription start site region 47376
Gm43682 5 93176970 to 93179059 2089 + unclassified gene predicted gene 43682
Ccni 5 93181933 to 93206495 24562 - protein coding gene cyclin I
Gm43681 5 93183856 to 93185758 1902 - unclassified gene predicted gene 43681
Tssr51937 5 93190277 to 93190285 8 - TSS region transcription start site region 51937
Tssr51938 5 93192942 to 93192946 4 - TSS region transcription start site region 51938
Gm2986 5 93195798 to 93196179 381 + pseudogene predicted gene 2986
Tssr51939 5 93205364 to 93205376 12 - TSS region transcription start site region 51939
Tssr47377 5 93205470 to 93205483 13 + TSS region transcription start site region 47377
Cpgi16071 5 93205478 to 93207025 1547 CpG island CpG island 16071
Tssr47378 5 93205644 to 93205679 35 + TSS region transcription start site region 47378
Tssr51940 5 93205714 to 93205718 4 - TSS region transcription start site region 51940
Tssr47379 5 93206003 to 93206020 17 + TSS region transcription start site region 47379
Tssr47380 5 93206046 to 93206052 6 + TSS region transcription start site region 47380
Tssr51941 5 93206442 to 93206470 28 - TSS region transcription start site region 51941
Tssr51942 5 93206489 to 93206498 9 - TSS region transcription start site region 51942
2010109A12Rik 5 93206518 to 93213474 6956 + protein coding gene RIKEN cDNA 2010109A12 gene
D5Dcr72 5 93210039 to 93210134 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 72