MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:92990026-93100064

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm36764	5	92988632 to 93009072	20440	-	lncRNA gene	predicted gene, 36764
Tssr47350	5	93003795 to 93003810	15	+	TSS region	transcription start site region 47350
Gm6450	5	93003831 to 93004404	573	+	pseudogene	predicted gene 6450
Gm25521	5	93013032 to 93013139	107	-	snRNA gene	predicted gene, 25521
Sowahb	5	93041123 to 93045022	3899	-	protein coding gene	sosondowah ankyrin repeat domain family member B
Skmw13	5	93042404 to 93042620	216		QTL	skeletal muscle weight 13
D5Mit19	5	93042404 to 93042620	216		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 19
Cpgi16069	5	93043763 to 93045536	1773		CpG island	CpG island 16069
9330159N05Rik	5	93044719 to 93048429	3710		protein coding gene	RIKEN cDNA 9330159N05 gene
Tssr51932	5	93045026 to 93045064	38	-	TSS region	transcription start site region 51932
Gm22915	5	93073861 to 93073996	135	+	snoRNA gene	predicted gene, 22915
Gm43172	5	93090994 to 93093130	2136	+	unclassified gene	predicted gene 43172
Cpgi16070	5	93092214 to 93094544	2330		CpG island	CpG island 16070
Gm43173	5	93092759 to 93093351	592	-	unclassified gene	predicted gene 43173
Tssr51933	5	93093119 to 93093137	18	-	TSS region	transcription start site region 51933
Tssr47351	5	93093428 to 93093444	16	+	TSS region	transcription start site region 47351
Sept11	5	93093437 to 93176447	83010	+	protein coding gene	septin 11
Tssr47352	5	93093473 to 93093483	10	+	TSS region	transcription start site region 47352
Tssr47353	5	93093498 to 93093549	51	+	TSS region	transcription start site region 47353