Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:92953831-93054404

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Shroom3	5	92683435 to 92965318	281883	+	protein coding gene	shroom family member 3
Tssr47347	5	92955054 to 92955058	4	+	TSS region	transcription start site region 47347
Tssr47348	5	92962068 to 92962093	25	+	TSS region	transcription start site region 47348
Tssr47349	5	92962161 to 92962173	12	+	TSS region	transcription start site region 47349
Tssr51931	5	92964770 to 92964787	17	-	TSS region	transcription start site region 51931
Cpgi16068	5	92964839 to 92964990	151		CpG island	CpG island 16068
Gm36764	5	92988632 to 93009072	20440	-	lncRNA gene	predicted gene, 36764
Tssr47350	5	93003795 to 93003810	15	+	TSS region	transcription start site region 47350
Gm6450	5	93003831 to 93004404	573	+	pseudogene	predicted gene 6450
Gm25521	5	93013032 to 93013139	107	-	snRNA gene	predicted gene, 25521
Sowahb	5	93041123 to 93045022	3899	-	protein coding gene	sosondowah ankyrin repeat domain family member B
Skmw13	5	93042404 to 93042620	216		QTL	skeletal muscle weight 13
D5Mit19	5	93042404 to 93042620	216		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 19
Cpgi16069	5	93043763 to 93045536	1773		CpG island	CpG island 16069
9330159N05Rik	5	93044719 to 93048429	3710		protein coding gene	RIKEN cDNA 9330159N05 gene
Tssr51932	5	93045026 to 93045064	38	-	TSS region	transcription start site region 51932