MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:92390056-92480065

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Art3	5	92331827 to 92414628	82801	+	protein coding gene	ADP-ribosyltransferase 3
Cpgi16059	5	92392435 to 92393311	876		CpG island	CpG island 16059
Tssr47312	5	92392713 to 92392724	11	+	TSS region	transcription start site region 47312
Tssr47313	5	92392730 to 92392743	13	+	TSS region	transcription start site region 47313
Tssr47314	5	92398051 to 92398057	6	+	TSS region	transcription start site region 47314
Nup54	5	92415540 to 92435219	19679	-	protein coding gene	nucleoporin 54
Gm26039	5	92429785 to 92429928	143	+	snoRNA gene	predicted gene, 26039
Cpgi16060	5	92434475 to 92435531	1056		CpG island	CpG island 16060
Gm42114	5	92434797 to 92436069	1272	+	lncRNA gene	predicted gene, 42114
Tssr51911	5	92435056 to 92435065	9	-	TSS region	transcription start site region 51911
Tssr51912	5	92435075 to 92435103	28	-	TSS region	transcription start site region 51912
Tssr51913	5	92435114 to 92435130	16	-	TSS region	transcription start site region 51913
Tssr51914	5	92435189 to 92435216	27	-	TSS region	transcription start site region 51914
Tssr51915	5	92435219 to 92435235	16	-	TSS region	transcription start site region 51915
Scarb2	5	92441311 to 92505657	64346	-	protein coding gene	scavenger receptor class B, member 2
Tssr51916	5	92443617 to 92443632	15	-	TSS region	transcription start site region 51916
Mir6415	5	92458557 to 92458656	99	+	miRNA gene	microRNA 6415
Tssr51917	5	92470866 to 92470880	14	-	TSS region	transcription start site region 51917
Tssr51918	5	92470892 to 92470905	13	-	TSS region	transcription start site region 51918