Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:92112938-92227798

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr47279 5 92112996 to 92113015 19 + TSS region transcription start site region 47279
Tssr47280 5 92113027 to 92113036 9 + TSS region transcription start site region 47280
Gm24931 5 92118177 to 92118283 106 - rRNA gene predicted gene, 24931
D430040L24Rik 5 92126174 to 92129749 3575 + lncRNA gene RIKEN cDNA D430040L24 gene
Tssr47281 5 92127293 to 92127316 23 + TSS region transcription start site region 47281
Tssr47282 5 92127339 to 92127349 10 + TSS region transcription start site region 47282
Tssr47283 5 92127350 to 92127357 7 + TSS region transcription start site region 47283
Cpgi16052 5 92137467 to 92138643 1176 CpG island CpG island 16052
Tssr51846 5 92137637 to 92137702 65 - TSS region transcription start site region 51846
Tssr51847 5 92137733 to 92137762 29 - TSS region transcription start site region 51847
Tssr51848 5 92137769 to 92137786 17 - TSS region transcription start site region 51848
Tssr47284 5 92137849 to 92137870 21 + TSS region transcription start site region 47284
Tssr47285 5 92137896 to 92137939 43 + TSS region transcription start site region 47285
Uso1 5 92137938 to 92202798 64860 + protein coding gene USO1 vesicle docking factor
Tssr47286 5 92137940 to 92137974 34 + TSS region transcription start site region 47286
Gm15710 5 92140294 to 92140929 635 - pseudogene predicted gene 15710
Tssr51849 5 92140965 to 92140977 12 - TSS region transcription start site region 51849
Gm43040 5 92191360 to 92191917 557 - unclassified gene predicted gene 43040
Gm25290 5 92193322 to 92193465 143 + snoRNA gene predicted gene, 25290
U90926 5 92209895 to 92215408 5513 - protein coding gene cDNA sequence U90926
Gm42113 5 92210177 to 92212757 2580 + lncRNA gene predicted gene, 42113
Tssr51850 5 92215345 to 92215354 9 - TSS region transcription start site region 51850
Gm42112 5 92216563 to 92224008 7445 + lncRNA gene predicted gene, 42112
Ppef2 5 92226679 to 92256278 29599 - protein coding gene protein phosphatase, EF hand calcium-binding domain 2