Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:91963064-92135960

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rchy1 5 91948904 to 91963068 14164 - protein coding gene ring finger and CHY zinc finger domain containing 1
Cpgi16049 5 91962430 to 91963401 971 CpG island CpG island 16049
Thap6 5 91962882 to 91972137 9255 + pseudogene THAP domain containing 6
Tssr51834 5 91963080 to 91963105 25 - TSS region transcription start site region 51834
Tssr51835 5 91963106 to 91963137 31 - TSS region transcription start site region 51835
Tssr47275 5 91963317 to 91963327 10 + TSS region transcription start site region 47275
Tssr47276 5 91963347 to 91963359 12 + TSS region transcription start site region 47276
Tssr51836 5 91972258 to 91972281 23 - TSS region transcription start site region 51836
Gm24113 5 91982705 to 91982980 275 + unclassified non-coding RNA gene predicted gene, 24113
Tssr47277 5 91987471 to 91987479 8 + TSS region transcription start site region 47277
Odaph 5 91987473 to 91995317 7844 + protein coding gene odontogenesis associated phosphoprotein
Cdkl2 5 92006074 to 92043042 36968 - protein coding gene cyclin-dependent kinase-like 2 (CDC2-related kinase)
Tssr51837 5 92015330 to 92015334 4 - TSS region transcription start site region 51837
Gm46915 5 92016095 to 92017114 1019 - protein coding gene predicted gene, 46915
Cpgi16050 5 92042264 to 92043379 1115 CpG island CpG island 16050
Tssr51838 5 92042630 to 92042701 71 - TSS region transcription start site region 51838
Tssr51839 5 92042999 to 92043051 52 - TSS region transcription start site region 51839
Gm26582 5 92043064 to 92055960 12896 + lincRNA gene predicted gene, 26582
Tssr51840 5 92050593 to 92050595 2 - TSS region transcription start site region 51840
G3bp2 5 92052146 to 92083719 31573 - protein coding gene GTPase activating protein (SH3 domain) binding protein 2
Gm22728 5 92056064 to 92056192 128 - snoRNA gene predicted gene, 22728
Gm42111 5 92061097 to 92062471 1374 - lncRNA gene predicted gene, 42111
Tssr51841 5 92065635 to 92065640 5 - TSS region transcription start site region 51841
Gm46933 5 92074726 to 92084165 9439 + protein coding gene predicted gene, 46933
Tssr51842 5 92075651 to 92075655 4 - TSS region transcription start site region 51842
Cpgi16051 5 92082794 to 92084111 1317 CpG island CpG island 16051
Tssr47278 5 92083429 to 92083441 12 + TSS region transcription start site region 47278
Tssr51843 5 92083455 to 92083466 11 - TSS region transcription start site region 51843
Tssr51844 5 92083667 to 92083726 59 - TSS region transcription start site region 51844
Tssr51845 5 92112248 to 92112276 28 - TSS region transcription start site region 51845
Tssr47279 5 92112996 to 92113015 19 + TSS region transcription start site region 47279
Tssr47280 5 92113027 to 92113036 9 + TSS region transcription start site region 47280
Gm24931 5 92118177 to 92118283 106 - rRNA gene predicted gene, 24931
D430040L24Rik 5 92126174 to 92129749 3575 + lncRNA gene RIKEN cDNA D430040L24 gene
Tssr47281 5 92127293 to 92127316 23 + TSS region transcription start site region 47281
Tssr47282 5 92127339 to 92127349 10 + TSS region transcription start site region 47282
Tssr47283 5 92127350 to 92127357 7 + TSS region transcription start site region 47283