Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:9146123-9601827

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dmtf1 5 9118868 to 9161776 42908 - protein coding gene cyclin D binding myb-like transcription factor 1
Gm46901 5 9158512 to 9161606 3094 - protein coding gene predicted gene, 46901
Tssr50104 5 9160908 to 9160912 4 - TSS region transcription start site region 50104
Cpgi15541 5 9160953 to 9162109 1156 CpG island CpG island 15541
Tssr50105 5 9161608 to 9161619 11 - TSS region transcription start site region 50105
Tssr50106 5 9161692 to 9161762 70 - TSS region transcription start site region 50106
Tssr45159 5 9161833 to 9161873 40 + TSS region transcription start site region 45159
Tssr45160 5 9161879 to 9161893 14 + TSS region transcription start site region 45160
Gm24666 5 9169063 to 9169229 166 + snRNA gene predicted gene, 24666
Gm7332 5 9260935 to 9261388 453 - pseudogene predicted gene 7332
Gm15734 5 9264222 to 9266022 1800 - lincRNA gene predicted gene 15734
Cpgi15542 5 9265810 to 9266621 811 CpG island CpG island 15542
Tssr45161 5 9266097 to 9266202 105 + TSS region transcription start site region 45161
9330182L06Rik 5 9266123 to 9481827 215704 + protein coding gene RIKEN cDNA 9330182L06 gene
Tssr45162 5 9295401 to 9295409 8 + TSS region transcription start site region 45162
Tssr50107 5 9300102 to 9300109 7 - TSS region transcription start site region 50107
Tssr50108 5 9300110 to 9300118 8 - TSS region transcription start site region 50108
Tssr50109 5 9300124 to 9300138 14 - TSS region transcription start site region 50109
Tssr50110 5 9300139 to 9300144 5 - TSS region transcription start site region 50110
Gm15733 5 9353759 to 9354000 241 + pseudogene predicted gene 15733
Mir879 5 9375704 to 9375779 75 + miRNA gene microRNA 879
Tssr50111 5 9480933 to 9480945 12 - TSS region transcription start site region 50111
Grm3 5 9485541 to 9725170 239629 - protein coding gene glutamate receptor, metabotropic 3
Tssr50112 5 9485641 to 9485645 4 - TSS region transcription start site region 50112
Cpgi15543 5 9570188 to 9570716 528 CpG island CpG island 15543
Gm42455 5 9599872 to 9602607 2735 - unclassified gene predicted gene 42455