Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:90516107-90642871

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr47162 5 90518941 to 90518956 15 + TSS region transcription start site region 47162
Afm 5 90518949 to 90553544 34595 + protein coding gene afamin
Tssr47163 5 90524813 to 90524839 26 + TSS region transcription start site region 47163
Tssr47164 5 90546288 to 90546289 1 + TSS region transcription start site region 47164
Gm2602 5 90558849 to 90559419 570 + pseudogene predicted gene 2602
Tssr47165 5 90561064 to 90561078 14 + TSS region transcription start site region 47165
Tssr47166 5 90561102 to 90561111 9 + TSS region transcription start site region 47166
5830473C10Rik 5 90561107 to 90597871 36764 + protein coding gene RIKEN cDNA 5830473C10 gene
Gm42109 5 90574145 to 90584972 10827 - lncRNA gene predicted gene, 42109
Tssr47167 5 90583251 to 90583255 4 + TSS region transcription start site region 47167
Cpgi16039 5 90588846 to 90589132 286 CpG island CpG island 16039
Rassf6 5 90603076 to 90640657 37581 - protein coding gene Ras association (RalGDS/AF-6) domain family member 6
Tssr51790 5 90639648 to 90639662 14 - TSS region transcription start site region 51790
Tssr51791 5 90639672 to 90639683 11 - TSS region transcription start site region 51791
Cpgi16040 5 90640188 to 90640658 470 CpG island CpG island 16040
Tssr51792 5 90640417 to 90640425 8 - TSS region transcription start site region 51792
Tssr51793 5 90640464 to 90640539 75 - TSS region transcription start site region 51793
Tssr51794 5 90640602 to 90640695 93 - TSS region transcription start site region 51794