MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:90276212-90456224

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ankrd17	5	90227166 to 90366572	139406	-	protein coding gene	ankyrin repeat domain 17
D5Wsu152e	5	90314711 to 90314959	248		DNA segment	DNA segment, Chr 5, Wayne State University 152, expressed
AU017193	5	90327599 to 90331506	3907		unclassified gene	expressed sequence AU017193
Tssr51741	5	90337688 to 90337693	5	-	TSS region	transcription start site region 51741
Tssr51742	5	90339724 to 90339802	78	-	TSS region	transcription start site region 51742
Cpgi16038	5	90365183 to 90367058	1875		CpG island	CpG island 16038
Tssr51743	5	90365230 to 90365253	23	-	TSS region	transcription start site region 51743
Tssr47073	5	90365383 to 90365419	36	+	TSS region	transcription start site region 47073
Tssr51744	5	90366176 to 90366192	16	-	TSS region	transcription start site region 51744
Tssr51745	5	90366212 to 90366224	12	-	TSS region	transcription start site region 51745
Tssr51746	5	90366504 to 90366609	105	-	TSS region	transcription start site region 51746
Tssr47074	5	90366616 to 90366671	55	+	TSS region	transcription start site region 47074
Gm9958	5	90367204 to 90368487	1283	+	unclassified gene	predicted gene 9958
Tssr47075	5	90367571 to 90367589	18	+	TSS region	transcription start site region 47075
Gm10426	5	90377734 to 90379042	1308		protein coding gene	predicted gene 10426
Gm43363	5	90397273 to 90399919	2646	+	unclassified gene	predicted gene 43363
Gm35999	5	90414392 to 90438690	24298	+	lncRNA gene	predicted gene, 35999
Tssr51747	5	90450154 to 90450158	4	-	TSS region	transcription start site region 51747