Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:89482218-90283935

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfibq5 5 84635994 to 89818182 5182188 QTL liver fibrosis QTL 5
Gm6366 5 89499152 to 89499977 825 - pseudogene predicted gene 6366
Gm43515 5 89522860 to 89525000 2140 + unclassified gene predicted gene 43515
Cpgi16035 5 89526951 to 89527106 155 CpG island CpG island 16035
Npffr2 5 89527429 to 89583740 56311 + protein coding gene neuropeptide FF receptor 2
Gm7056 5 89616436 to 89622611 6175 + lncRNA gene predicted gene 7056
Tssr51726 5 89676898 to 89676902 4 - TSS region transcription start site region 51726
Adamts3 5 89677087 to 89883334 206247 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
Gm25320 5 89681916 to 89682239 323 + unclassified non-coding RNA gene predicted gene, 25320
Gm42162 5 89689329 to 89690335 1006 - pseudogene predicted gene, 42162
Gm25758 5 89828871 to 89828999 128 + snoRNA gene predicted gene, 25758
Cpgi16036 5 89882218 to 89883935 1717 CpG island CpG island 16036
Tssr51727 5 89883297 to 89883309 12 - TSS region transcription start site region 51727
Tssr51728 5 89883321 to 89883343 22 - TSS region transcription start site region 51728
Tssr51729 5 89883345 to 89883378 33 - TSS region transcription start site region 51729
Tssr51730 5 89883465 to 89883512 47 - TSS region transcription start site region 51730
Eif5al3-ps 5 90132229 to 90132675 446 + pseudogene eukaryotic translation initiation factor 5A-like 3, pseudogene
D5Mit361 5 90155427 to 90155536 109 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 361
Gm35936 5 90193305 to 90200360 7055 + lncRNA gene predicted gene, 35936
Cox18 5 90214724 to 90223996 9272 - protein coding gene cytochrome c oxidase assembly protein 18
Cpgi16037 5 90223453 to 90224310 857 CpG island CpG island 16037
Tssr51731 5 90223923 to 90224020 97 - TSS region transcription start site region 51731
Ankrd17 5 90227166 to 90366572 139406 - protein coding gene ankyrin repeat domain 17
Tssr51732 5 90228979 to 90228998 19 - TSS region transcription start site region 51732
Tssr51733 5 90243779 to 90243825 46 - TSS region transcription start site region 51733
Tssr51734 5 90243850 to 90243861 11 - TSS region transcription start site region 51734
Tssr51735 5 90243979 to 90244051 72 - TSS region transcription start site region 51735
Tssr51736 5 90244354 to 90244366 12 - TSS region transcription start site region 51736
Tssr47071 5 90246799 to 90246823 24 + TSS region transcription start site region 47071
Tssr47072 5 90247269 to 90247274 5 + TSS region transcription start site region 47072
D5Ertd236e 5 90252136 to 90252377 241 DNA segment DNA segment, Chr 5, ERATO Doi 236, expressed
Tssr51737 5 90254770 to 90254812 42 - TSS region transcription start site region 51737
Tssr51738 5 90260154 to 90260183 29 - TSS region transcription start site region 51738
Tssr51739 5 90263336 to 90263369 33 - TSS region transcription start site region 51739
Tssr51740 5 90263381 to 90263395 14 - TSS region transcription start site region 51740