Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:89121038-89421147

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc4a4 5 88886818 to 89239653 352835 + protein coding gene solute carrier family 4 (anion exchanger), member 4
D5Dcr51 5 89144799 to 89144894 95 DNA segment DNA Segment, Chr 5, Derry C. Roopenian 51
Tssr47066 5 89149353 to 89149369 16 + TSS region transcription start site region 47066
Tssr1536 5 89180817 to 89180821 4 + TSS region transcription start site region 1536
D5Mit274 5 89198911 to 89199011 100 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 274
Tssr51699 5 89209109 to 89209121 12 - TSS region transcription start site region 51699
Gm35855 5 89221737 to 89223927 2190 - lncRNA gene predicted gene, 35855
Tssr51700 5 89223857 to 89223887 30 - TSS region transcription start site region 51700
Tssr47067 5 89236279 to 89236289 10 + TSS region transcription start site region 47067
Tssr47068 5 89237256 to 89237269 13 + TSS region transcription start site region 47068
D5Mit272 5 89255624 to 89255751 127 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 272
Hbnr10 5 89271017 to 89271152 135 QTL Heligmosomoides bakeri nematode resistance 10
D5Mit259 5 89271017 to 89271152 135 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 259
D5Mit398 5 89271038 to 89271147 109 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 398
Tssr51701 5 89416278 to 89416283 5 - TSS region transcription start site region 51701
Tssr51702 5 89416339 to 89416342 3 - TSS region transcription start site region 51702
Gc 5 89417522 to 89457898 40376 - protein coding gene vitamin D binding protein
Tssr51703 5 89419049 to 89419053 4 - TSS region transcription start site region 51703
Eae39 5 118725963 to 89271017 -29454946 QTL experimental allergic encephalomyelitis susceptibility 39
Skts4 5 124100176 to 89271017 -34829159 QTL skin tumor susceptibility 4
Prnr1 5 146851125 to 89271017 -57580108 QTL prion resistance 1