MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:89044799-89244894

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slc4a4	5	88886818 to 89239653	352835	+	protein coding gene	solute carrier family 4 (anion exchanger), member 4
D5Mit311	5	89050781 to 89050899	118		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 311
Tssr47060	5	89050787 to 89050791	4	+	TSS region	transcription start site region 47060
Tssr47061	5	89083764 to 89083771	7	+	TSS region	transcription start site region 47061
Tssr47062	5	89085500 to 89085520	20	+	TSS region	transcription start site region 47062
Tssr47063	5	89102050 to 89102059	9	+	TSS region	transcription start site region 47063
Tssr47064	5	89102097 to 89102127	30	+	TSS region	transcription start site region 47064
Tssr47065	5	89108733 to 89108744	11	+	TSS region	transcription start site region 47065
D5Dcr51	5	89144799 to 89144894	95		DNA segment	DNA Segment, Chr 5, Derry C. Roopenian 51
Tssr47066	5	89149353 to 89149369	16	+	TSS region	transcription start site region 47066
Tssr1536	5	89180817 to 89180821	4	+	TSS region	transcription start site region 1536
D5Mit274	5	89198911 to 89199011	100		DNA segment	DNA segment, Chr 5, Massachusetts Institute of Technology 274
Tssr51699	5	89209109 to 89209121	12	-	TSS region	transcription start site region 51699
Gm35855	5	89221737 to 89223927	2190	-	lncRNA gene	predicted gene, 35855
Tssr51700	5	89223857 to 89223887	30	-	TSS region	transcription start site region 51700
Tssr47067	5	89236279 to 89236289	10	+	TSS region	transcription start site region 47067
Tssr47068	5	89237256 to 89237269	13	+	TSS region	transcription start site region 47068