Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:88688886-88898897

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi16031 5 88688913 to 88689113 200 CpG island CpG island 16031
Cpgi16032 5 88720553 to 88722069 1516 CpG island CpG island 16032
Tssr51697 5 88720769 to 88720782 13 - TSS region transcription start site region 51697
Tssr47022 5 88720857 to 88720876 19 + TSS region transcription start site region 47022
Mob1b 5 88720871 to 88758455 37584 + protein coding gene MOB kinase activator 1B
Tssr47023 5 88720879 to 88720925 46 + TSS region transcription start site region 47023
Tssr47024 5 88720929 to 88720977 48 + TSS region transcription start site region 47024
Tssr47025 5 88721057 to 88721065 8 + TSS region transcription start site region 47025
Gm15682 5 88739247 to 88739729 482 - pseudogene predicted gene 15682
Tssr51698 5 88739771 to 88739774 3 - TSS region transcription start site region 51698
Tssr47026 5 88750667 to 88750671 4 + TSS region transcription start site region 47026
Tssr47027 5 88758078 to 88758092 14 + TSS region transcription start site region 47027
Tssr47028 5 88758637 to 88758642 5 + TSS region transcription start site region 47028
Cpgi16033 5 88764789 to 88765639 850 CpG island CpG island 16033
Tssr47029 5 88764928 to 88764946 18 + TSS region transcription start site region 47029
Tssr47030 5 88764983 to 88764995 12 + TSS region transcription start site region 47030
Tssr47031 5 88765004 to 88765030 26 + TSS region transcription start site region 47031
Dck 5 88765013 to 88783277 18264 + protein coding gene deoxycytidine kinase
Tssr47032 5 88765036 to 88765054 18 + TSS region transcription start site region 47032
Tssr47033 5 88765149 to 88765160 11 + TSS region transcription start site region 47033
Tssr47034 5 88765169 to 88765191 22 + TSS region transcription start site region 47034
Tssr47035 5 88765192 to 88765199 7 + TSS region transcription start site region 47035
Tssr47036 5 88765200 to 88765211 11 + TSS region transcription start site region 47036
Tssr47037 5 88765212 to 88765223 11 + TSS region transcription start site region 47037
Tssr47038 5 88765849 to 88765852 3 + TSS region transcription start site region 47038
Tssr47039 5 88781961 to 88781973 12 + TSS region transcription start site region 47039
Tssr47040 5 88782029 to 88782040 11 + TSS region transcription start site region 47040
Tssr47041 5 88782192 to 88782203 11 + TSS region transcription start site region 47041
Tssr47042 5 88782266 to 88782301 35 + TSS region transcription start site region 47042
Tssr47043 5 88782537 to 88782573 36 + TSS region transcription start site region 47043
Tssr47044 5 88793865 to 88793874 9 + TSS region transcription start site region 47044
Tssr47045 5 88793886 to 88793897 11 + TSS region transcription start site region 47045
Gm42912 5 88793896 to 88813470 19574 + lincRNA gene predicted gene 42912
Tssr47046 5 88793933 to 88793936 3 + TSS region transcription start site region 47046
Tssr47047 5 88793942 to 88793945 3 + TSS region transcription start site region 47047
Gm42911 5 88803594 to 88805223 1629 - pseudogene predicted gene 42911
Tssr47048 5 88815831 to 88815840 9 + TSS region transcription start site region 47048
Tssr1535 5 88815860 to 88815868 8 + TSS region transcription start site region 1535
Tssr47049 5 88825180 to 88825184 4 + TSS region transcription start site region 47049
Mkrn1-ps1 5 88838010 to 88839399 1389 - pseudogene makorin, ring finger protein 1, pseudogene 1
Cpgi16034 5 88886415 to 88888031 1616 CpG island CpG island 16034
Tssr47050 5 88886809 to 88886825 16 + TSS region transcription start site region 47050
Slc4a4 5 88886818 to 89239653 352835 + protein coding gene solute carrier family 4 (anion exchanger), member 4